KEGG   Halorubrum sp. PV6: DOS48_00920
Entry
DOS48_00920       CDS       T05770                                 
Name
(GenBank) peptidase
  KO
K03420  proteasome regulatory subunit
Organism
halp  Halorubrum sp. PV6
Pathway
halp03050  Proteasome
Brite
KEGG Orthology (KO) [BR:halp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    DOS48_00920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:halp03051]
    DOS48_00920
Proteasome [BR:halp03051]
 Prokaryotic proteasome
  Archaeal regulatory particles
   DOS48_00920
SSDB
Motif
Pfam: AAA AAA_lid_3 AAA_2 RuvB_N AAA_5 AAA_16 AAA_22 AAA_17 DUF815 Prot_ATP_ID_OB_C NPHP3_N TIP49 Mg_chelatase AAA_14 AAA_7 Sigma54_activat RNA_helicase AAA_28 NACHT ATPase AAA_24 nSTAND3 AAA_3 PhyR_sigma2 GrpE AAA_18 Parvo_NS1 MIPOL1_N IstB_IS21 AAA_lid_PRS2_C AAA_33 TsaE NB-ARC CCPG1_N ATPase_2 Bac_DnaA AAA_25 TUDOR nSTAND_NTPase5 Sigma54_activ_2 ABC_tran bZIP_1 Fungal_TACC DUF2334 Mgr1 DUF8221 COG4_N Rab11-FIP3
Other DBs
NCBI-ProteinID: AZQ13492
LinkDB
Position
205000..206217
AA seq 405 aa
MTDTVDDVELPYDEGSASRQEKIELLQERLDVLESQNEEMRDKLLDANAENNKYQQKLER
LTHENKKLKQSPLFVATVQEITPDGAVIKQHGNNQEALTEITAEMRESLNPDDRVAVNNS
LSVVKKLEKETDVRARVMQVEHSPDVTYADIGGLEEQMQEVRETVEMPLEHPDMFADVGI
TPPSGVLLYGPPGTGKTMLAKAVANETDATFIKMAGSELVHKFIGEGAKLVRDLFEVARE
NQPAVLFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDVRIIAATNRFDM
LDPAILRPGRFDRLIEVPKPGTEGREIIFQIHTRKMNLASDIDFTELAEMTPEASGADVK
AICTEAGMFAIRDDRTEVTLNDFLGAHEKLQQDDETGADDSLAFA
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgactgacaccgtcgacgacgtcgaactcccctacgacgaggggtcggcgtcgagacag
gagaagatcgagttactccaagagcggctcgacgtgctcgagtcgcagaacgaagagatg
cgcgacaagcttctcgacgcgaacgccgagaacaacaagtaccagcagaagctcgaacgg
ctcacccacgagaacaagaagctgaaacagtccccgctgttcgtggcgacggtccaggag
atcacgcccgacggcgccgtgatcaaacagcacgggaacaatcaggaggcgctcaccgag
atcaccgccgagatgcgcgagagcctcaacccggacgaccgcgtcgcggtgaacaactcg
ctgtccgtcgtcaagaaattagagaaggagacggacgttcgcgctcgcgtgatgcaggtc
gagcactcgcccgacgtcacctacgccgacatcggcgggctcgaagagcagatgcaggag
gtccgcgagaccgtcgagatgcccctcgaacaccccgacatgttcgcggatgtcggcatc
acgcccccgagcggcgtgctgctgtacggtccgccgggcaccgggaagacgatgctggcg
aaggcggtcgccaacgagacggacgcgacgttcatcaagatggccggctccgaactcgtc
cacaagttcatcggcgagggcgcgaagctggtccgcgacctcttcgaggtcgcccgcgag
aaccagccggccgtcctcttcatcgacgagatcgacgcgatcgcctcgaagcggaccgac
tcgaagacctccggcgacgccgaggtccagcgcacgatgatgcagctgctctccgagatg
gacggcttcgacgagcgcggcgatgtccgaatcatcgcggccaccaaccgcttcgatatg
ctcgaccccgccatcttacggccggggcgcttcgaccgcctcatcgaggtcccgaagccg
ggcaccgagggccgcgagatcatcttccagatccacacgcggaagatgaacctcgcgagc
gacatcgacttcaccgaactcgcagagatgacgccggaggcgtcgggcgccgacgtgaaa
gccatctgtaccgaggccgggatgttcgcgatccgcgacgaccgcaccgaggtcaccctc
aacgacttcctcggggcacacgagaaactccagcaggacgacgagaccggcgcggacgac
tcgctggcgttcgcctga

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