Halorubrum sp. PV6: DOS48_01265
Help
Entry
DOS48_01265 CDS
T05770
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
halp
Halorubrum sp. PV6
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halp03032
]
DOS48_01265
03400 DNA repair and recombination proteins [BR:
halp03400
]
DOS48_01265
Enzymes [BR:
halp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DOS48_01265
DNA replication proteins [BR:
halp03032
]
Prokaryotic type
DNA Topoisomerases
DOS48_01265
DNA repair and recombination proteins [BR:
halp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DOS48_01265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
HHH
DNA_pol_lambd_f
Cdd1
Toprim_4
DUF4332
Lar_restr_allev
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AZQ13556
UniProt:
A0A3S9LD93
LinkDB
All DBs
Position
complement(285436..288030)
Genome browser
AA seq
864 aa
AA seq
DB search
MSRGPELIITEKDNAARRIADILSGESATAERENDVNVYKWGGKRCIGLSGHVVGVDFPA
EYNDWRDVEPVELIDAPVTKSPTQEGIVRALRKLARNASRVVIATDYDREGELIGKEAYE
LVREVNEDAPVDRVRFSSITENEVTEAFANPDELDFDLAAAGEARQVIDLTWGAALTRFL
SLSARQLGDDFISVGRVQGPTLKLIVDREREIQAFDPEAYWELSGSLTKSGGDPFEAQYF
YLNDEGNEAQRVWDGEVSEVLTEALGAADEAIVDDVRRRTRTDEPPTPFNTTAFIRAAGS
LGYSAQRAMSLAEDLYTAGYVTYPRTDNTVYPEDLEPRELIEELSAASAFGDDAKQLLDQ
DEIAPTEGDKQTTDHPPIHPTGELPSASDLSEDEWEVYELVVRRFFATCAEPATWERLRV
VALANGEATEIARRADGVAALRDPDEASGAGDLAADGGLRLKANGKRLLEAGYHDVYPYR
SSDERIVPDVEVGETLALTDRQTDAKETQPPRRYGQSRLIEEMEKRGVGTKATRHRTLEK
LYDRNYIESDPPRPTRLAEAVVEAAEEFAEHIVSEEMTAQLERDMQSIAAGEKGYDEVTA
ASRELLDRVFEDLTESREAVGDHLQKSMKADKTLGPCPECGEDLLVRKSRQGSYFVGCDG
YPDCEYTLPLPSTGKPLILDETCEDHDLGHVKMLAGRKTFVHGCPQCKADEADEKEDEVI
GACPDCGEEHGGELAIKRLRSGSRLVGCTRYPDCDYSLPLPRRGEIEVTDETCEEHGLPH
LRVHSGDEPWELGCPICNYREFSARQAGSELETVDGIGEKTAEKLKDAGVDGVDTLKSVD
PDDLAADIDGVGPDTVRDWQANAD
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcggccccgaactgataatcacggagaaggacaacgcggcgcgtcgcatcgcc
gacatcctgagcggcgagtccgcaaccgccgagcgggagaacgacgtgaacgtgtacaag
tggggcggcaagcggtgtatcggcctctccggtcacgtcgtcggcgtcgacttccccgcc
gagtacaacgactggcgcgacgtcgagccggtggaactcatcgacgcgccggtcacgaaa
tcgccgacgcaggagggaatcgtccgcgcgctccggaagctcgcgcgcaacgcctcgcgc
gtcgtcatcgcgaccgactacgaccgcgagggcgaactgatcgggaaagaggcgtacgaa
ctggtccgcgaggtcaacgaggacgccccggtcgaccgggtccgattctcctcgatcacc
gaaaacgaggtgacggaggcgttcgcgaaccccgacgaactcgacttcgatctggccgcc
gccggggaggcgcggcaggtgatcgacctgacgtggggcgcggcgctcacccgcttcctc
tcgctttcggcccgccagctcggcgacgacttcatctcggtggggcgggtccagggcccg
acgctcaaactgatcgtcgaccgcgaacgcgagatacaggcgttcgaccccgaggcctac
tgggagctgtcggggagcctgaccaagtccggcggcgacccgttcgaagcgcagtacttc
tatttaaacgacgagggcaacgaggcccaacgcgtctgggacggcgaggtcagcgaggtc
ctcacggaagcgctcggggcggccgacgaggcaatcgtcgacgacgtgcgccgccgcacc
cgcaccgacgagccgccgacgccgttcaacaccacggcgttcatccgggcggcggggtcg
ctcggctactccgcccagcgcgcgatgtcgctcgcggaggacctgtacaccgccggctac
gtcacctacccccggacggacaacacggtgtaccccgaggacctggagccgcgagagctg
atcgaggagctctccgcggcctcggcgttcggcgacgacgcgaagcagctgctcgatcaa
gacgagatagcacccaccgaaggcgacaagcagacgaccgaccacccgccgatccacccg
accggagagctcccctccgcgtccgacctctccgaggacgagtgggaggtgtacgagctc
gtcgtgcgccgctttttcgcgacctgcgccgagcccgcgacgtgggaacggctccgcgtc
gtcgcgctcgccaacggcgaggcgaccgagatcgcccgacgcgcggacggggtcgccgcc
cttcgcgatccggacgaggcgagcggtgccggggacctcgccgccgacggcgggctccgg
ctgaaggccaacgggaagcgcctcctggaggcggggtaccacgacgtgtatccgtaccgc
tccagcgacgagcggatcgttccggacgtggaagtcggcgagacgctcgcgctcaccgac
cggcagacggacgccaaggagacccaaccgccgcgcagatacggccagtcccggctcatc
gaggagatggagaagcgcggggtcggcacgaaggcgactcgccaccgcaccctcgaaaag
ctgtacgatcgcaactacatcgagagtgacccgccgcgcccgactcgtctcgcggaggcg
gtcgtggaggccgccgaggagttcgccgagcacatcgtcagcgaggagatgaccgcccag
ctcgaacgcgacatgcagtctatcgcggccggtgagaaggggtacgacgaggtgacggct
gcctcgcgcgaactcctcgaccgcgtgttcgaggatctcaccgagtcccgcgaggccgtc
ggcgaccacctccagaagtcgatgaaggcggacaagacgctcggtccctgccccgaatgc
ggcgaggacctgctcgtccggaagtcgcgacaggggtcgtacttcgtcggctgtgacggc
taccccgactgcgagtacaccctcccgctcccctcgacggggaagccgctcatcttggac
gagacctgcgaggaccacgatctcggccacgtgaagatgctcgcgggccggaagacgttc
gtccacgggtgcccgcagtgcaaggccgacgaggccgacgagaaggaagacgaggtgatc
ggtgcgtgtcccgactgcggagaagagcacgggggggagttggctatcaagcgcctccgc
tccggctcccggctcgtcggctgtacgcgctaccccgactgcgactactcgctgccgctc
ccccgccgcggcgagatagaggtcaccgacgagacctgcgaggagcacggcctcccgcac
ctccgggtccactccggcgacgagccgtgggaactgggctgcccgatctgcaactaccgc
gagttcagcgcccggcaggcggggtcggagttagagaccgtcgacggcatcggcgagaag
accgcggagaagctgaaagatgccggcgtcgacggcgtcgacacgctcaaatcggtggac
ccagacgacctggccgccgacatcgacggcgtcggccccgacacggttcgcgactggcag
gcgaacgccgactaa
DBGET
integrated database retrieval system
