Halorubrum sp. PV6: DOS48_01520
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Entry
DOS48_01520 CDS
T05770
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
halp
Halorubrum sp. PV6
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halp03400
]
DOS48_01520
Enzymes [BR:
halp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DOS48_01520
DNA repair and recombination proteins [BR:
halp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DOS48_01520
Prokaryotic type
DOS48_01520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
AZQ13605
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All DBs
Position
337460..338845
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AA seq
461 aa
AA seq
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MQVFWHRRDPRTRDNAGLAAAARAGTVLPVFVYDVDLFGTMGARQRAFLLRHVKRLEARY
RDLGSDLVVRAGAPDEVLVDVADEHDAETVFYNEYYRPARRNRQRAVEDALAGAGVATDS
RTDAVLVDPGRLEARYENHSRFHDDWEAVPKAGPYPEPEPSSLADVRDGKTVPEPDADID
LPDAGYEAARERFDDFLDYGITSYNDTRDDLRRAAEAPTHAVSRLSPYLATGAIGIREVW
AGAGDVYEAVTGGERRNVDKYRYELSWREQMYHLLYYTPDLGVSNYKSFPNAIAWRDADA
DFEAWTRGETGYPLVDAGMRQLNAEGYIHNRPRQVVASFLAKHLLIDWRRGARYFTKQLI
DHDYASNHGAWQWTASTGTDSVDVRIFDPVSQMSKYDEGAHFVKAYVPELRDVPAGKIVD
WPTLSHGEREDLAPDYPHPIVDRNEGYDRAQRVFEEALGKR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtattctggcaccggcgcgacccgcgaacgcgggacaacgccggactcgcggcg
gcggcgcgggcgggaaccgtcctccccgtcttcgtctacgacgtcgacctcttcggcacg
atgggagcgcgccagcgggcgttcctcctccggcacgtgaagcggctggaggcgcgctac
cgcgacctcggcagcgacctcgtcgtccgcgcgggcgcccccgacgaggtcctcgtcgac
gtcgcagacgagcacgacgccgagaccgtcttttacaacgagtactaccggccggcccgg
cgcaaccgccagcgcgcggtcgaggacgccctcgcgggcgccggcgtggcgacggactcg
cggaccgacgccgtcttggtcgatccgggccggctggaggcgcgctacgagaaccacagc
cggttccacgacgactgggaggcggtccccaaagccggcccgtatccggagcccgagccg
tcgtcgctcgctgacgtgcgcgacgggaagacggtccccgagccggacgccgacatcgac
ctcccggacgcgggctacgaggccgcccgcgagcggttcgacgacttcctcgactacggg
atcacctcgtacaacgacacgcgagacgacctccggcgcgccgccgaggcgcccacgcac
gcggtctcgcgcctgtccccgtacctcgcgaccggcgcgatcgggatccgcgaggtgtgg
gcgggcgcgggcgacgtttacgaggccgtcaccggcggcgagcgccgcaacgtcgacaag
taccgctacgagctgtcgtggcgcgagcagatgtaccacctgctgtactacacccccgac
ctgggggtgtcgaactacaagtcgttcccgaacgcgatcgcgtggcgcgacgccgacgcc
gacttcgaggcgtggacgcgcggcgagacgggctaccccctcgtcgacgccgggatgcgg
cagctgaacgcggaggggtacatccacaaccgcccgcggcaggtggtcgcgagcttcctc
gcgaaacacctcctgatcgactggcggcggggcgcgcgctacttcacgaaacagctgatc
gaccacgactacgcctcgaaccacggcgcgtggcagtggaccgcctcgaccggcaccgac
tcggtcgacgtccgcatcttcgacccggtgagccagatgagcaagtacgacgagggcgcc
cacttcgtgaaggcgtacgtccccgaactccgggacgtacccgccgggaaaatcgtcgac
tggccgacgctctcgcacggcgagcgcgaggacctcgcgcccgactacccgcacccgatc
gtcgaccggaacgaggggtacgatcgcgcgcagcgcgtcttcgaggaggcgctcgggaag
cggtga
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