Halorubrum sp. PV6: DOS48_01810
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Entry
DOS48_01810 CDS
T05770
Name
(GenBank) transcription initiation factor IIB 3
KO
K03124
transcription initiation factor TFIIB
Organism
halp
Halorubrum sp. PV6
Pathway
halp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DOS48_01810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halp03021
]
DOS48_01810
Transcription machinery [BR:
halp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DOS48_01810
Prokaryotic type
Archaeal type
TFB
DOS48_01810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
AZQ13656
UniProt:
A0A3Q9E9R9
LinkDB
All DBs
Position
complement(396802..397794)
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AA seq
330 aa
AA seq
DB search
MTRPTRQRDHDRQRVRDEDADETETDAEGVDADELDPEEFDPEELTRTADGELIHEETGL
IVEEEQIDPGPEWRAFNHSERQSKSRVGAPTTKTMHDKGLTTTIDWKDKDAYGRSISSKK
RSQMHRLRKWQERIRTKDAGERNLQFALSEVDRMASALGVPRSVREVASVIYRRALNEDL
IRGRSIEGVSTAALYAACRKEGIPRSLEEISDVSRVERKEIGRTYRYISQELGLEMRPVD
PKKYVPRFSSELELSEEVQSKANEIIETTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKT
QREVADVAQVTEVTIRNRYQEQIEAMGIHT
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgacacggccaacccggcaacgggatcacgaccggcagcgtgtgcgcgacgaggatgcc
gacgaaaccgagaccgacgccgagggggtcgacgccgacgagctagaccccgaggagttc
gacccggaagaactcacccggacggccgacggggagctgatacacgaggagaccggactc
atcgtcgaggaggaacagatcgatcccggcccggagtggcgggcgttcaaccactcggag
cgccagtcgaagtcccgcgtcggcgccccgacgacgaagacgatgcacgacaaggggctg
acgacgaccatcgactggaaggacaaagacgcctacggccgttccatctcgtcgaaaaag
cggtcgcagatgcaccggctgcggaagtggcaagagcgcatccggacgaaggacgccggc
gagcgcaacctccagttcgcgctctccgaagtcgatcggatggccagcgcgctcggcgtc
ccccggtcggtacgggaggtcgcctccgtcatctaccgacgcgcgttgaacgaggacctg
atccgtgggcggtcgatcgagggcgtctccaccgccgccctctacgccgcctgccggaag
gaggggattccccggtcgctcgaagagatatccgacgtgtcgcgggtcgagcgcaaggag
atcggtcgcacgtaccgctacatctcacaggaactcggattagagatgcggccggtcgac
ccgaaaaagtacgtcccgcgcttctcctcggagctcgaactgagcgaggaggtccagtcg
aaggccaacgagatcatcgagaccacggccgaacaggggctgctctccgggaagtccccg
accggctacgccgcggcggcgatctacgccgcctcgctgctctgtaacgagaagaagacc
caacgagaggtcgccgacgtggcgcaggtgacggaggtcaccatccggaatcggtatcaa
gagcagatcgaggcgatggggatccacacgtaa
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