Halorubrum sp. PV6: DOS48_01950
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Entry
DOS48_01950 CDS
T05770
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
halp
Halorubrum sp. PV6
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
halp03009
]
DOS48_01950
Ribosome biogenesis [BR:
halp03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
DOS48_01950
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
AAA_16
AAA_23
Fer4_6
AAA_14
AAA_29
AAA
AAA_22
Fer4
RsgA_GTPase
nSTAND3
AAA_24
NB-ARC
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
AZQ13682
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Position
423060..424880
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AA seq
606 aa
AA seq
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MADDSIAVVDLDRCQPDRCNYECANYCPPNRTGKECITERGEDAVEGDPDQIHISEEICL
GETCGICVEKCPFDAIEIINLPSELDEDPVHRYGDNAFSLYGLPTPEPGNVTGILGPNGI
GKSTAVHGLAGEMIPNLGDHEATAEWDRVLDRFRGTGLQNYLSSLKEGDVTVARKPQYVD
QIPNQFDGNTRELLERTDERGALDDLIDRLNIRPVMDQNIDSISGGELQRVAIAACLARD
ADFYFLDEITPYLDIGQRMVVARLIRELADDDAADRSMLVVEHDLAILDLLADTLHVAYG
EPGAYGVITGPKSVRNGINEYLKGYLDNENMRIRPSAITFEEHAPRVASRSETLIEYPDL
SKSYGDGEFELHVEGGAINRSEVLGIVGPNGIGKSTLAKLFAGSLEPDTGSLDFALDIAY
KPQYIEIDQPMRVDAFLASITDDFGSSYWNTEIAQPLQLDRVMEQNLSDLSGGERQRVAI
AACLSEDAELYLLDEPSAHLDVEQRVRATTAIRRYAENHDATVMVIDHDIYMIDLLADRL
MVFDGEPAERGHATPPQEMREGMNEFLADLDITFRRDERTGRPRINKPGSQLDSQQKRDG
EYYYST
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacagtatcgccgtggtcgacctcgatcggtgtcaacccgaccgctgtaac
tacgagtgtgcgaactactgccccccgaaccggacggggaaagagtgcatcaccgagcgc
ggcgaggacgccgtcgagggcgaccccgaccagatccacatctccgaagagatctgtctc
ggtgagacctgcggtatctgcgtcgagaagtgcccgttcgacgccatcgagatcatcaac
ctcccctccgaactcgacgaggacccggttcaccgctacggcgacaacgccttctcgctg
tacgggctgccgactcccgaaccgggcaacgtcaccggtatcttagggccgaacgggatc
gggaagtcgaccgcggttcacggcctcgccggcgagatgattccgaacctcggcgaccac
gaagcgacggccgagtgggaccgcgtgctggaccggttccgcggcaccgggctccagaac
tacctcagttcgctgaaggagggcgacgtgacggtcgcccgcaagccccagtacgtcgac
cagattccgaaccagttcgacgggaacacccgcgaactgctggagcgaaccgacgagcgc
ggcgcgctcgacgacctcatcgaccgcctcaacatccggccggtgatggaccagaacatc
gattccatctccgggggcgaactccagcgcgtcgccatcgcggcgtgtctggcccgcgac
gccgacttctacttcctcgacgagatcacgccgtacctcgacatcggccagcggatggtc
gtcgcccgactcatccgcgagctcgcggacgacgacgccgccgaccgttcgatgctcgtc
gtcgaacacgacctcgccatcctcgacctgctcgccgacaccctccacgtcgcgtacggt
gagccgggcgcgtacggggtcatcaccggccccaagtcggtgcgaaacgggatcaacgag
tacctgaaagggtacctcgacaacgagaacatgcggatccgcccctcggctatcaccttc
gaggagcacgcgccgcgcgtcgcctcgcggagcgagacgctgattgagtaccccgactta
tcgaagtcctacggcgacggcgagttcgagctccacgtcgagggcggcgcgatcaaccgt
tccgaagtcctcgggatcgtcgggccgaacgggatcgggaaatcgacgctcgcgaagctg
ttcgcgggctcgctggagccggacacgggatcgctcgacttcgcgctcgacatcgcctac
aagccgcagtacatcgagatcgaccagccgatgcgcgtcgacgcgttcctcgcgtcgatc
accgacgacttcgggagctcctactggaacaccgagatcgcccagccgctccaactcgac
cgcgtgatggagcagaacctctcggacctctccggcggggagcgacagcgggtcgcgatc
gcggcgtgtctctccgaggacgccgagctgtacttactcgacgagccctccgcgcacctc
gacgtggaacagcgggtgcgcgcgacgaccgcgatccggcggtacgcggagaaccacgac
gcgaccgtgatggtgatcgaccacgacatctacatgatcgatctcctcgccgaccgcctg
atggtgttcgacggcgagccggccgagcgcgggcacgcgaccccgccccaggagatgcgc
gagggcatgaacgagttcctcgccgacttagacatcactttccggcgcgacgagcggacc
ggtcgcccccggatcaacaagccgggctcgcagctcgacagccaacagaagcgcgacggc
gagtactactactcgacgtaa
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