KEGG   Halorubrum sp. PV6: DOS48_02525
Entry
DOS48_02525       CDS       T05770                                 
Name
(GenBank) endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
halp  Halorubrum sp. PV6
Pathway
halp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:halp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DOS48_02525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:halp03400]
    DOS48_02525
Enzymes [BR:halp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     DOS48_02525
DNA repair and recombination proteins [BR:halp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     DOS48_02525
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AZQ13786
UniProt: A0A3S9LDX6
LinkDB
Position
complement(535016..535852)
AA seq 278 aa
MSLKVGAHVSIAGGVDNAVENQVEVGGNCGQIFTHSPQVWQDPNIGDEEAERFREGTERD
LDGPWVIHTSYLVNLCTPKDGLREKSLDSMQKEVDAAAKLDIPYVNVHLGAHTGAGVEGG
LDNAASVIDDIDVPEGVTILIESDAGAGTKLGGEFEHLAGIIDRTETDIDVCVDTAHAFA
AGYDLSTPEAVDETLAEFDDVVGLEHLAYVHLNDSKHACGTHKDEHAHIGEGHIGEAGME
RFLNHPALADVPLALETPTEDGKSFAWNIDRVRELRAD
NT seq 837 nt   +upstreamnt  +downstreamnt
atgagtctcaaggtcggcgcgcacgtctccatcgcgggcggcgtagacaacgcggtcgag
aaccaggtcgaggtcggcggcaactgcggacagatattcacccactcgccgcaggtgtgg
caggacccgaacatcggcgacgaggaggccgaaaggttccgtgaggggaccgagcgcgac
ctcgacgggccgtgggtgatccacacctcctacctcgtgaacctctgtacgccgaaagac
gggctccgcgagaagtcgctcgactcgatgcaaaaggaggtcgacgcggccgcgaagctc
gacatcccctacgtcaacgtccacctcggcgcccacaccggcgcgggcgtcgagggcggc
ctcgacaacgccgcctcggtgatagacgacatcgacgtgccggagggcgtcacgatcctg
atcgagagcgacgcgggcgcggggacgaaactcggcggcgagttcgaacacctcgcgggg
atcatcgaccgcacggagaccgacatcgacgtctgcgtcgacaccgcacacgccttcgcg
gccggctacgacctctcgacgcccgaggcggtcgacgagacgctcgcggagttcgacgac
gtggtggggttagaacacttggcgtacgtccacctcaacgactcgaaacacgcctgcggc
acccacaaagacgagcacgcccacattggcgagggccacatcggcgaggcggggatggag
cggttcctcaaccacccggcgctcgcggacgtgccgctcgcgctggagacgcccaccgag
gacgggaagagtttcgcgtggaacatcgaccgcgtccgggaacttcgcgccgactga

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