Halorubrum sp. PV6: DOS48_02580
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Entry
DOS48_02580 CDS
T05770
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
halp
Halorubrum sp. PV6
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halp03000
]
DOS48_02580
Transcription factors [BR:
halp03000
]
Prokaryotic type
Helix-turn-helix
Other families
DOS48_02580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
TrAA12
Phage_attach
Motif
Other DBs
NCBI-ProteinID:
AZQ13797
UniProt:
A0A3Q9EAA3
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All DBs
Position
complement(548212..549345)
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AA seq
377 aa
AA seq
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MDDRTLNDLLRRFGLSDKEVDTYLSLLAHGEAKASTVADAAGVSKRYVYSVSESLAERGF
VEVNDHVVPTTIRANPPDEVINRLRSDVDAIRPGLEERFSRTERETEQFEVIKSRVTVMK
RIRSLLADADSEVALSIAGEHLPEIREALAAAVDRGVLVLLIVSGDDVPDDVEGGVDGVA
NVVRAWGEAMPTLLTVDSATGVVAPPALLRRADTDRQAIHFAQEQLAPVIVGSFLGNYWP
AATEVATAAPAALPTEYANFRHTVFQATLRLRDGETPRVTVGGRWTAADEPVEITGRVVE
SKQGMVEPTTNEFPVEHSLVVESDEGERVTVGGQGAFVEDVEADLVRIEAADERGDADGD
GRGDTEGGERGDAEGDE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcggacgctgaacgacctcctccgccggttcggactctctgataaggaagtc
gacacctacctcagtctgttggcccacggcgaggcgaaggcgagcacggtcgccgacgcc
gccggcgtgtcgaaacgctacgtctacagcgtgagcgagtcgctggcggagcgcggcttc
gtcgaggtgaacgaccacgtcgtaccgacgacgatccgcgcgaacccgcccgacgaggtg
ataaaccgcctccggtcggacgtggacgcgatccggcccggcctggaagagcggttctcg
cggaccgagcgagagacggagcagttcgaggtcatcaagtcccgcgtcaccgtgatgaag
cggatccgctcgctgctcgcggacgcggactccgaggtggcgctttcgatcgccggagag
cacctccccgagatccgcgaggcgctcgccgcggccgtcgaccggggcgtgctcgtgctc
ctcatcgtctccggcgacgacgtgcccgacgacgtggagggcggtgtcgacggcgtcgcg
aacgtggttcgggcgtggggagaggcgatgccgacgctgctcacggtcgactccgcgacc
ggcgtcgtcgcgcccccggcgctcctgcgccgggccgacaccgaccgacaggcgatccac
ttcgcgcaagagcagctcgccccggtgatcgtcgggtcgttcctcgggaactactggccg
gcggcgaccgaagtcgcgaccgccgcgccggccgcgctccccaccgagtacgcgaacttc
agacacaccgtctttcaggccacgctgcggctccgcgacggggagaccccccgcgtcacc
gtcggggggcggtggacggccgccgacgagccggtcgagatcaccgggcgcgtcgtggag
tcgaaacaggggatggtggagccgacgacgaacgagttccccgtcgaacactcgctggtc
gtcgagagcgacgagggcgagcgcgtcaccgtgggcgggcagggcgccttcgtggaggac
gtcgaggccgacctcgtccggatcgaggcggccgacgagcgcggggatgccgatggcgac
gggcggggagataccgaaggcggtgagcgcggggacgccgagggcgacgagtag
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