Halorubrum sp. PV6: DOS48_06375
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Entry
DOS48_06375 CDS
T05770
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
halp
Halorubrum sp. PV6
Pathway
halp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DOS48_06375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halp03021
]
DOS48_06375
Transcription machinery [BR:
halp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DOS48_06375
Prokaryotic type
Archaeal type
TFB
DOS48_06375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Sigma70_r4
Anti-TRAP
HTH_Tnp_ISL3
UPF0547
Zn_ribbon_tTFIIB
Zn_ribbon_LysW
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AZQ14484
LinkDB
All DBs
Position
complement(1310405..1311379)
Genome browser
AA seq
324 aa
AA seq
DB search
MSENVRTYTAEHVDETEPETESANEELRCPECDGQLATDTEHGETVCVDCGLVVEENEID
RGPEWRAFDSKEKDTKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGKSLSSRQREKMQRLR
TWNERFRTRDSKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALDEDLLPGRSIEG
VSTASLYAAARQAGTPRSLDEIAGVSRVEKDEIARTYRYVVRELKLEIQPADPGSYVPRF
ASDLGLSDEAERRARSLLDTAKSQGLHSGKSPVGLAAAAVYAASLLVNEKVTQSDVSDVA
NISEVTIRNRYHELLEAEDGVALN
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacgttcgaacgtatacggcggagcacgtcgacgagacagagcccgagacc
gaatcggcgaacgaggagctgcgctgcccggagtgtgacggccagctcgcgaccgacacg
gaacacggcgagacggtctgtgtcgactgcggactcgtcgttgaggaaaacgagatcgac
cgcgggccggagtggcgcgcgttcgactcgaaggagaaagacaccaagtcgcgcgtcggc
gccccgacgacgaacatgatgcacgacaaggggctctcgacgaacatcggctggcaggac
aaagacgcctacgggaagtccctgtcgagccgccagcgcgagaagatgcagcggctgcgg
acctggaacgagcggttccgcacccgcgactcgaaggagcgcaacctgaaacaggcgctc
ggcgagatcgatcggatggcctcggcgctcggtctcccggacaacgtccgtgagaccgcc
tccgtcatctaccggcgcgcgctcgacgaggacctgctccccggtcgctccatcgagggc
gtctcgacggcgtcgctgtacgccgccgcccggcaggcggggaccccgcgaagcctcgac
gagatcgcgggcgtctcgcgggtggagaaagacgagattgcccggacctaccgctacgtc
gtccgcgaactcaagttagagattcagccggccgaccccggcagctacgtcccccggttc
gcctccgacctcggcctgtcggacgaggcggagcgacgggcgcgctcgctgctcgacacc
gcgaagtcgcaagggcttcactcggggaaatcgcccgtcggcctcgcggcggccgccgtg
tacgccgcctcgctgctcgtcaacgagaaggtgacccagagcgacgtcagcgacgtcgcc
aacatcagcgaggtcaccatccggaaccgataccacgagctgctcgaagccgaggacggc
gtcgcgctgaactga
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