Halorubrum sp. PV6: DOS48_07120
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Entry
DOS48_07120 CDS
T05770
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
halp
Halorubrum sp. PV6
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halp03016
]
DOS48_07120
Enzymes [BR:
halp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
DOS48_07120
Transfer RNA biogenesis [BR:
halp03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
DOS48_07120
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
ELP3_N
Radical_SAM
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Motif
Other DBs
NCBI-ProteinID:
AZQ14620
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Position
complement(1454000..1455724)
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AA seq
574 aa
AA seq
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MSTDAATEGDAGSDGDDGEPEAFVRACEHLVDRILDGEIGRDELESAKLDACSEFSSPKV
PKNTEILDHAPQEARDDVIEVVQRKPVRTASGVSPVAIMTSPKLCPHGKCLYCPGGPASE
FSSAQSYTGHEPAAARGEQNDYDPYGQVTLRLEQLRKIGHPVDKVELILMGGTMTARSHD
YQEWFVKRALQAMNDYDLDKEPEPAEGESFAPAPEETSFEYLEDVIARNETNEIRNIGTT
FETKPDWCDPEQIDRMLDLGGTKVEVGVQTTYERINREMHRGHGNEASRNANRRLRDAAF
KVGFHMMPGQPGMTKEMCIEDFRQIFENSDWRPDYLKIYPTLVVEGTRVYDRWRREEFEP
LSNEEAADVVAEAMDQIPKYTRLQRVQRDIPADFIEGGVWKSNLRQLADQRAEEKGITQR
DIRAREVGHNDADPEPDDVELDVMTYEAGGGTEHFISFEDPVRDLLVGFCRLRFPSFAPG
QPGAPGTETDAIRPELEDAALLRELHVYGSEVAIGGDGDWQHQGYGRKLLERAEETAREA
GYRKLAIISGIGAREYYRTKLGYHQDGPYVSKRL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgacgcggcgaccgagggggacgccggaagcgacggcgacgacggcgaaccc
gaggcgttcgtccgggcctgcgaacacctcgtcgaccggattctcgacggggagatcggt
cgcgacgagttggaatccgccaaactcgacgcctgttccgagttctcttcgccgaaggtg
ccgaagaacaccgaaatcctcgatcacgccccgcaagaggcccgcgacgacgtgatcgaa
gtcgtccagcggaagccggtccgaaccgcgtccggcgtctctccggtcgcgatcatgacc
tccccgaagctgtgtccgcacgggaaatgcctctactgtccgggcgggccggcctcggag
ttctcctcggcgcagtcgtacacgggccacgagcccgccgcggcccgcggcgagcagaac
gactacgacccgtacgggcaggtcacgctccgactcgaacagctccggaagatcggccac
ccggtcgataaggtcgaactcatcctgatgggcgggacgatgaccgctcgctcgcacgac
tatcaagagtggttcgtcaagcgcgccctgcaggcgatgaacgactatgatctcgacaaa
gagcccgagccggccgaaggcgagtcgttcgcgcccgcccccgaagagacctccttcgag
tacctcgaagacgtgatcgcgagaaacgagaccaacgagatccgcaacatcgggacgacg
ttcgagacgaaacccgactggtgtgaccccgaacagatcgaccgaatgctcgatctcggg
gggaccaaagtcgaggtcggcgtccagaccacctacgagcggatcaaccgcgagatgcat
cgcggccacggcaacgaggcctcgcgcaacgccaaccgccgcctccgcgacgccgcgttc
aaagtcggcttccacatgatgcccggtcagccggggatgacgaaggagatgtgtatcgag
gatttccgacagatcttcgagaactccgactggcggccggactacctgaagatctacccg
acgctcgtcgtcgaggggacgcgggtgtacgaccgctggcgccgcgaggagttcgaaccg
ctctcgaacgaggaggctgcagacgtcgtcgccgaggcgatggaccagattccgaagtac
acccggctccagcgcgtccagcgcgacattccggccgacttcatcgagggcggcgtctgg
aagtcgaacctccggcagctcgccgaccagcgcgccgaggagaaggggatcacccagcgg
gacatccgcgcccgcgaggtcggtcacaacgacgccgacccggagcccgacgacgtggaa
ctcgacgtcatgacctacgaggccggcggcgggacggaacacttcatctccttcgaagac
cccgttcgggacctcctcgtcgggttctgtcgcctgcggttcccctccttcgcgcccggc
cagcccggcgcacccggcaccgaaaccgacgcgatccgccccgaactggaagacgccgcg
ctgctccgcgaactccacgtgtacggcagcgaagtcgccatcggcggcgacggcgactgg
cagcatcaggggtacggccgaaagctcctcgaacgcgccgaggagaccgcccgcgaggcc
ggctaccgcaaactcgcgatcatctccggaatcggggcgcgagagtactaccggaccaag
ctcggctaccaccaagacggcccgtacgtctcgaagcggctctga
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