Halorubrum sp. PV6: DOS48_07280
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Entry
DOS48_07280 CDS
T05770
Name
(GenBank) 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
halp
Halorubrum sp. PV6
Pathway
halp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DOS48_07280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halp03400
]
DOS48_07280
Enzymes [BR:
halp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DOS48_07280
DNA repair and recombination proteins [BR:
halp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DOS48_07280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
Motif
Other DBs
NCBI-ProteinID:
AZQ14650
LinkDB
All DBs
Position
complement(1490243..1491169)
Genome browser
AA seq
308 aa
AA seq
DB search
MEHGAIDIADLAGPFDLQATVESGQSYLWNRADGKTYEDLHAHGGDAWYETVVDPIPGVT
DERMPVRVRQTGGVHDGTLHWQSSDDVVPLLTHLFRLDDDLDAILDATPDLPLLERAYDA
YEGMRLTRDPVFPCLISFICSAQMRVARIHGMQRRLRETYGDTLTLDGNEYRAFPTPDQL
ASRTEEELRDLSLGYRAPYVRRSAEMVASGEAHPAEAADLPYEEARESLTRFVGVGEKVA
DCVLLFSLGFLEAVPLDTWIRTTIEEYYPECEGGNYTETSRAIRERFGGEFAGYAQTYVF
YYLRAGGE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaacacggcgcgatcgacatcgcggatctggccggcccgttcgacctgcaggcgacc
gtcgagagcggccaaagttacctctggaatcgcgccgacggcaagacgtacgaggaccta
cacgctcacggcggcgacgcgtggtacgagaccgtcgtcgacccgatacccggcgtgacc
gacgagcggatgccggtcagggtacgacaaacgggcggcgtccacgacgggacgcttcac
tggcagtcgtcggacgacgtggtacccctcttgacgcacctgttccgcctcgacgacgac
ctcgatgcgatcctcgatgcgacccccgacctcccgctcctcgaacgggcgtacgacgcc
tacgaggggatgcggctcacgcgcgatccggtgttcccgtgtctcatctcgtttatttgc
tcggcacagatgcgcgtcgcgcgaatccacgggatgcagcgccgcctccgagagacctac
ggcgacaccctaacgctcgacgggaacgagtaccgtgcgttcccgacaccggatcaactc
gcgtcacggacggaagaggaactccgcgacctctccttagggtaccgcgcgccgtacgtc
cgccggagcgcggagatggtcgcctccggcgaggcacaccccgcggaggcggcggacctc
ccctacgaggaggcgcgcgagtcgctgacgcggttcgtgggcgtcggcgagaaggtcgcg
gactgcgtgctgttgttctcgctcgggttcctcgaagccgtcccgctcgacacctggata
cgaacgacgatagaggagtactacccggagtgtgagggcgggaactacaccgagacgtcg
cgcgcgatccgcgagcggtttgggggtgagtttgcgggctacgctcagacgtacgtcttc
tactatctccgtgccggcggcgagtag
DBGET
integrated database retrieval system
