Halorubrum sp. PV6: DOS48_07385
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Entry
DOS48_07385 CDS
T05770
Name
(GenBank) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
halp
Halorubrum sp. PV6
Pathway
halp03022
Basal transcription factors
halp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DOS48_07385
09124 Replication and repair
03420 Nucleotide excision repair
DOS48_07385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halp03021
]
DOS48_07385
03400 DNA repair and recombination proteins [BR:
halp03400
]
DOS48_07385
Enzymes [BR:
halp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DOS48_07385
Transcription machinery [BR:
halp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DOS48_07385
DNA repair and recombination proteins [BR:
halp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DOS48_07385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
LAGLIDADG_3
Intein_splicing
Helicase_C
HTH_3
DEAD
HTH_AsnC-type
HTH_31
SNF2-rel_dom
TrmB
MarR_2
HTH_IclR
HTH_20
DUF7342
DUF4283
Motif
Other DBs
NCBI-ProteinID:
AZQ14663
UniProt:
A0A3Q9ECK0
LinkDB
All DBs
Position
1516060..1519443
Genome browser
AA seq
1127 aa
AA seq
DB search
MTDDSGAPAADAEAGADAGDADDPASDAAEPDKGLSLDRFHEALEAEERPVATASEVARR
LGTTQAAARDALGALVDRGDVDRLDVESDPVVFFPRDWGRLATRERVVAFPDRREIVVDR
PTQFTRARLSQFAHLVDTTGTDPGTRGYLYRIRQEDVWAAPFDDADALIASLRSVLPRRF
SHLEEWIRDQWRRAHRFRLYTHEDGYVVLEAAAESLMGNVADQHLDDDHLRAPISETEAW
VNEDAVAGVKRALYDAGYPVEDDRDLDVGDPVDVELTTDLRAYQETWVETFLDARSGVYV
GPPGSGKTVAAIATIAAVGGETLILVPSRELAGQWREELLDHSTVDPADIGEYHGGQKDI
RPITIATYQIAGMDRHRALFDSRKWGLICFDECLTGDTIVETPSGRTTFDELDERYELED
GWTTDIDLSVRTFNRERGTYRFTPITGIYKSTAPVERIETRQGYPITATPRHTHFVFDPG
SARISKQKGVSEGDFIVRPQTESKKYTETNALSLASAELLGWFLGDGHRDRHGHAKFSFA
RKKREQISILEDLCNRIELDYSVFENSRGDLTLWSKRFADTLPWDIPSGSKAERVTVPRD
AYGWHPDQVGALLRGLFDAEGSVDKKGRIQLNTISERLAKDVVLLLQHLRIPSKCLNLDR
DSPHSDLFRILIASRYGVLFSEKVGFRLQYKSERISVGKTPATGVPVGTYLKRIKDDVEL
SNEQIADMTDVSKQTIGDVIRGKNRLGQQHLSSLAEGLRKYAQTDPISINAMREDSNITY
AEIGDKLDVSTSHAYTLVGRGNERTVKVIGERDRDCRRKAAAHADRLDRLADLQLVEVTS
VTKKGVETVYDFETRDHTFVADGYLTHNCHHITAPVFSRSAELQTRHRLGLSATPVRETG
SEEEIYTLIGRPIGADWDELFDAGFVQEPEVEIRYVPWRDEMARNEYASADGRERRRLAA
ENPAKIEEIRYLLAAHRDKKALVFIEYLDQGEAIADALGVPFISGETPHHERAALFRQFR
DDGADAGPNDADAGPDGKGSGVDTIVVSRVGDEGIDLPNAEVAIVASGLGGSRRQGSQRA
GRTMRPSGSALVYVLATRGSSEEDFAQRQMRHLARKGIRVRETNVAE
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgattccggcgcacccgctgcggacgccgaggccggggccgatgccggcgac
gcggacgacccggcctctgacgccgcggaacccgacaaaggactctcgctcgaccgcttt
cacgaggcgttagaggccgaagagcgtccggtcgcgaccgccagcgaggtcgcgagacgg
ctcgggacgacgcaggcggccgcgcgagacgcactcggtgcgctcgtcgaccgcggcgac
gtcgaccgactggacgtcgagagcgacccggtcgtcttcttcccgagggactggggccga
ctggcgacccgcgagcgcgtggtcgcgttcccggatcggcgcgaaatcgtcgtcgaccgc
ccgacgcagttcacccgcgcgcggctctcccaatttgcccacctcgtcgacaccacgggg
accgaccccggcactcgcgggtacctctatcgcatcagacaggaggacgtgtgggcggcg
cccttcgacgacgccgacgcgctgatcgcgagcctccggtcggtgctcccccgccggttc
agccacctcgaagagtggatccgcgaccagtggcgccgcgcgcaccgcttccggttatat
acccacgaggacggctacgtcgtcttggaggccgccgcggagagtctgatggggaacgtc
gccgaccagcacctcgacgacgaccacctccgggcgcccatctccgagacggaggcgtgg
gtcaacgaggacgccgtcgccggcgtcaaacgcgccctctacgacgccggctacccggtc
gaggacgaccgcgacctcgacgtgggcgacccggtcgacgtcgagttgacgaccgacctc
agggcctatcaggagacgtgggtcgagaccttcctcgacgcgcgctccggggtgtacgtc
gggccgcccggctccggcaagaccgtcgccgccatcgccaccatcgccgcggtcggcggc
gagaccttgattctcgtcccctcccgcgaactcgcgggccagtggcgcgaggaactcctc
gaccactcgacggtcgacccggccgacatcggcgagtaccacggcggacagaaggatatc
cgaccgatcacgatcgcgacctaccagatcgccgggatggaccgccatcgcgcgctgttc
gactcgcggaagtgggggttgatctgcttcgacgagtgtctgaccggagacactatcgtt
gaaaccccgtctggaaggacgacgttcgatgaactcgatgagagatatgagctggaggat
gggtggacgacagatatcgatctctcggtccgtactttcaaccgggagcgtggcacgtac
cgatttacccccatcacgggtatttataaatcgacggcgccggtcgaacggatcgaaaca
cgtcagggatacccgataacggcgactccgaggcacactcacttcgttttcgaccccggc
tctgcacgtatctcgaagcaaaaaggtgtctctgagggtgatttcattgtaaggccgcaa
acagagtcgaagaagtatacggagacaaacgcgttgagtcttgcatctgccgaactgctc
ggctggttcctcggagacggtcaccgagatcgtcacggccacgcaaagttctctttcgca
cggaaaaagcgggaacagatcagtatactcgaagatctgtgtaaccggatcgaactcgac
tactcggtgtttgagaacagtagaggtgatctcacgttgtggtcgaaacgctttgcagat
acacttccgtgggacatcccttccgggagtaaggcggagagagtgactgttccgcgggac
gcatacggatggcacccagaccaagtcggcgcgctgttgaggggactattcgatgccgag
ggctctgttgacaagaagggacgaatacagcttaacacgatctcagagcgactcgcgaag
gacgtcgtattgcttctacagcacctcagaatcccgtcgaaatgtctcaaccttgaccga
gactctccgcacagcgatctgtttcggatactgatcgcctcgcggtacggggtgttattc
tctgagaaagtcggattcagattacagtataaatcggagcggatatcggttggcaagaca
cctgcaacgggggttcccgtcggaacgtatctaaaacggatcaaagacgacgtggaactt
tcgaatgaacagatcgcagatatgaccgacgtctccaaacaaacgatcggtgatgtcatt
cgcgggaagaaccgtttgggacagcaacatctgagttccctcgctgaggggcttcgaaaa
tacgcacaaaccgatccaatctcaatcaatgcgatgcgtgaagatagtaacatcacgtac
gcggaaatcggcgacaaactagatgtctcaaccagtcatgcgtatacactggttggccga
ggaaatgagcgaacggtgaaagtgatcggtgaacgcgatcgggactgtcggagaaaggca
gccgcgcatgcagatcggttggatcggctcgcagatttacaacttgtcgaagtcacatcg
gtcacgaaaaaaggcgttgagacggtgtatgacttcgagacacgggatcacacgttcgtc
gcagatggctatctaacgcacaactgccaccacatcacggcgccggtcttctccagatct
gccgagttacagaccagacaccgcctcggcctctcggccacgccggtccgcgagaccggc
agcgaggaggagatatacaccctgatcggccgaccgatcggcgccgactgggacgaactc
ttcgacgccggcttcgtgcaagaaccggaagtcgagatccggtacgtcccgtggcgcgac
gagatggctcgcaacgagtacgccagcgccgacgggcgcgagcgacgccggctcgcggcc
gagaaccccgcgaagatcgaggagatccggtacctgctcgccgcccaccgcgacaagaag
gcgctcgtcttcatcgagtatctcgatcagggggaggccatcgccgacgcgctcggcgtc
ccgtttataagcggggagacgccgcaccacgagcgcgcggcgttgttccgacagttccgc
gacgacggcgcggacgccggacccaacgacgcggacgccggccccgacggaaaggggagc
ggagtcgacacaatcgtcgtctcgcgcgtcggcgacgaggggatcgacctgccgaacgcc
gaggtcgcgatcgtcgccagcgggctcggcggctcgcgccgccagggctcacagcgcgca
ggccgcaccatgcgaccgtccggctcggcgctcgtgtacgtcctcgcgacccgcgggtcg
agcgaggaggacttcgcgcagcgacagatgcgacacctcgcacgcaaggggatccgggtg
cgagagacgaacgtcgcggagtga
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