Halorubrum sp. PV6: DOS48_08470
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Entry
DOS48_08470 CDS
T05770
Name
(GenBank) ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
halp
Halorubrum sp. PV6
Pathway
halp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
DOS48_08470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halp03019
]
DOS48_08470
03009 Ribosome biogenesis [BR:
halp03009
]
DOS48_08470
04131 Membrane trafficking [BR:
halp04131
]
DOS48_08470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
halp04147
]
DOS48_08470
Messenger RNA biogenesis [BR:
halp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
DOS48_08470
Ribosome biogenesis [BR:
halp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
DOS48_08470
Membrane trafficking [BR:
halp04131
]
SNARE
SNARE associated proteins
Others
DOS48_08470
Autophagy
Aggrephagy
Other aggrephagy associated proteins
DOS48_08470
Exosome [BR:
halp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DOS48_08470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
AAA_28
AAA_7
IstB_IS21
Mg_chelatase
Sigma54_activat
AAA_25
AAA_17
ABC_tran
ATPase
NB-ARC
AAA_18
nSTAND_NTPase5
AAA_3
DUF815
Parvo_NS1
TsaE
AAA_24
AAA_11
AAA_30
Zeta_toxin
SLFN-g3_helicase
ResIII
NACHT
Vps4_C
PhoH
IPT
Motif
Other DBs
NCBI-ProteinID:
AZQ14860
LinkDB
All DBs
Position
complement(1731678..1733900)
Genome browser
AA seq
740 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEAEKAETLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPDGICMITEDTEVELREEPISGFE
KTGGGITYEDIGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLETRGQVVVIGATNRVDSVDPALRRPGRFDREIEIGVPDEV
GRKEVLQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDDE
EVPPSLIDRMIVKRDDFSGALTEVEPSAMREVLVELPKISWEDVGGLSEAQQQVQESVEW
PLTTPEKFDRMGVDAPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDGLEEMGDV
MVIGATNRPDMIDPALLRSGRFDRLVMIGQPDQGGREQILDIHTQDTPLAPDVSLREIAE
ITDGYVGSDLEGIAREAAIEALRDDDDAEDVEMKHFRRALESVRPTITDDILAYYEEVEE
QFKGGNGNALRDTGGRIGFQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtccaactcgaagtggcgaaggcgtacccgaacgactcggggcgcggaatc
gcccgactcgaccccgacacgctgttgcatctcaagctctcgcccggcgacatcatcgag
atcgagggcgccgagaccaccgccgcgaaggtctggcgtgcggatcggcaagactggaac
acggacaccgtccggatcgacgggttcacgcgacagaacgccgatgtcggcatcggcgag
cgcgtcaccatccggaaggcggaagccgagaaggccgagacgctcgtgctggccccgccc
gaggaggcgtcggtgcagttcggctccgacgcggccggcatggtcaaacgccagatcctg
aagcgtccggtcgtcgaacgcgacatcgtcccggtgatgtcctcgacgaaccacccgttc
atgcggtcgcccggacaggcgatcccgctgatcgcggtcgagaccgagccagacggcatc
tgcatgataaccgaagacaccgaagtcgagctccgcgaggagccgatctcgggcttcgag
aagaccggcggcggcatcacctacgaggacatcggcgggctccagtcggagatccagcgc
gtccgcgagatggtcgagctgccgatgaaacacccgcagatcttctcgaaactcggcatt
gagccgccgcagggcgtcctcttacacggtccgccgggcaccgggaagaccctgctcgcg
aaggcggtcgccaacgagacgtcggcgtcgttcttctcgatcgccggcccggagatcatc
tcgaagtactacggcgagtccgaacagcagctccgagagatcttcgaggacgccaaagag
gagagcccgagcatcatcttcatcgacgaactcgactcgatcgcccccaaacgtgaggac
gtgaccggcgaggtcgagcgccgcgtcgtcgcccagttgctgacgatgatggacgggctc
gaaacccgcggccaggtggtcgtcatcggcgcgacgaaccgggtcgacagcgtcgatccc
gcccttcgccgtcccggtcggttcgaccgcgagatcgagatcggcgtccccgacgaggtg
ggccgcaaagaggttctccagatccacacccgcgggatgccgctctcggacgacgtgagc
ttggaccacctcgccgacgagacgcacgggttcgtcggcgccgacatcgagagcctgacc
aaggaggccgcgatgaaggcgctgcggcggtacctccccgagatcgacttagacgacgag
gaggtgccgccgagcctgatcgaccggatgatcgtcaaacgcgacgacttctcgggcgcg
ctcacggaggtcgagccctccgcgatgcgggaggtcctcgtcgaactcccgaagatatcc
tgggaggacgtgggcggtctcagcgaggcccaacagcaggtccaggagtcggtcgagtgg
ccgctcacgactcccgagaagttcgaccggatgggcgtcgacgccccgaagggcgtgctg
ttgtacggcccgccggggaccggcaagacgctgatggcgaaggcggtcgccaacgagacg
aacgccaacttcatctcggtcagagggccgcagctgctctcgaagtgggtcggcgagtcc
gagaaggcgatccggcagaccttccgcaaggcgcggcaggtgagccccacgatcatcttc
ttcgacgagctcgacagcctcgcgccgtcgcgcggtcaggagatggggaataacgtctcc
gagcgcgtcgtcaaccagctgttgaccgagctcgacgggttagaggagatgggcgacgtg
atggtcatcggcgccaccaaccggcccgacatgatcgaccccgcgctgctccgctcgggc
cggttcgaccgcctcgtgatgatcggccagccggaccagggcggtcgcgagcagatcctc
gacatccacacgcaggacacgccgctcgcgcccgacgtgagcctccgggagatcgccgag
atcacagacgggtacgtcggctccgacctggagggtatcgcccgcgaggccgccatcgag
gcgctgcgcgacgacgacgacgccgaggacgtggagatgaagcacttccggcgcgcgctg
gagtcggtgcgcccgacgatcaccgacgacatcctcgcgtactacgaggaggtcgaagag
cagttcaagggcggcaacggcaacgccttacgcgacaccggcggccggatcgggttccag
tag
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