KEGG   Halorubrum sp. PV6: DOS48_08635
Entry
DOS48_08635       CDS       T05770                                 
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
halp  Halorubrum sp. PV6
Pathway
halp03030  DNA replication
Brite
KEGG Orthology (KO) [BR:halp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DOS48_08635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:halp03032]
    DOS48_08635
DNA replication proteins [BR:halp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     DOS48_08635
SSDB
Motif
Pfam: AAA RCF1-5-like_lid AAA_30 AAA_22 RuvB_N AAA_lid_RFC1 nSTAND3 AAA_28 AAA_33 AAA_16 DNAX_ATPase_lid AAA_assoc_2 AAA_5 IstB_IS21 RNA_helicase NACHT Zeta_toxin NPHP3_N AAA_14 DUF815 RsgA_GTPase TsaE Gp44_lid AAA_7
Other DBs
NCBI-ProteinID: AZQ14886
LinkDB
Position
complement(1763360..1764835)
AA seq 491 aa
MADWTERYRPSTLSEVRGNDKARDAFADWARSWDDHREAVVLHGSPGVGKTSAAHALAND
MGWETVELNASDQRTADVIERFAGRAARNATLGGSAAGGGAAGGDTASRQLVILDEADNI
HGNYDRGGASAITKLVKESGQPIVLIANDYYDMARGLRSATQEIEFRDVSARSIVPVLRD
ICRREDIEFESDALERIAERNRGDLRGAINDLQAATEGRASISLEDVVTGDRDKALGLFP
FLDAVLKEESAEEALQSAYAVDETPDDLTKWIENNVLDVYDSGEEVRAYDFLANADVWLG
RVRATQNYTYWRYATDNAAAGVAAARDGTKGGWTRYGRPQFWSSSDATADEVVGQIAAAS
GCSVATARREVLPFLKAITHHCKPRELTIAMAAAYDLDEAGVAFVTGSGESTNKVESVVE
DAQNLRDEQMEDNAEGAFAGGRQTAAIDDAADDAGAERDESTAGDERDATDEPAGDDDSE
DDGQAGLSDFV
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggccgattggaccgagcggtaccgcccgagcacgctctcggaggtccgcggcaacgac
aaggcccgcgacgcgttcgcagactgggcacgctcgtgggacgaccaccgcgaggccgtc
gtcctccacgggagtccgggggtcgggaagacgagcgcggcccacgcgctcgcaaacgac
atgggctgggagacggtcgaactgaacgcctccgaccaacgcaccgccgacgtcatcgag
cggttcgccggccgagccgcccgcaacgccaccctcggcgggagcgcggccggcggcggc
gcggccgggggcgacaccgcctcccgacagctcgtcatcttagacgaggccgacaacatc
cacggcaactacgaccgcggcggcgcgagcgcgataacgaaactggtcaaggagtcgggc
cagcccatcgtcctcatcgcgaacgactactacgacatggcccgcgggctccggagcgcc
acccaagaaatcgagttccgcgatgtctctgcacgctccatcgtccccgttctgcgggat
atctgccggagggaggacatcgagttcgagtcggacgcgctcgaacgcatcgccgagcgc
aaccgcggcgacctccgcggcgcgatcaacgatcttcaggcggcgacggaggggcgagcg
tcgatatcgctcgaagatgtcgtcaccggcgaccgcgataaggcgctcggactcttcccg
tttctcgatgcggtattaaaagaggagtccgcagaggaggcgctgcagtcggcgtacgcg
gtcgacgagacgcccgacgacctcaccaagtggatcgagaacaacgtcctcgacgtgtac
gattcgggcgaggaggtccgggcgtacgacttcctcgcgaacgccgacgtgtggctgggc
cgcgtccgcgccacgcaaaactacacctactggcgctacgccaccgacaacgccgctgcc
ggcgtcgccgccgcacgcgacgggacaaagggcgggtggacgcgctacggccgcccgcag
ttctggagttcctcggacgcgaccgccgacgaagtcgtcggacagattgccgccgccagc
ggctgtagcgtcgcgaccgcgcgccgggaagtgctcccgttcctgaaagcgatcacccac
cactgcaagccccgcgaactgacgatcgcgatggcggccgcctacgacctcgacgaagcg
ggagtcgcgttcgtcaccggctctggcgagtcgacgaacaaggttgaatcagtcgtcgag
gacgcgcagaaccttcgggacgagcagatggaggacaacgccgagggtgcctttgccggg
ggacgacagacggcagcgatcgacgatgcggccgacgatgccggcgcggagcgcgacgag
tcgaccgctggcgacgagcgcgacgccaccgacgagccagccggcgacgacgattccgag
gacgacggacaggccgggctgagcgacttcgtgtga

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