Halorubrum sp. PV6: DOS48_08750
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Entry
DOS48_08750 CDS
T05770
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
halp
Halorubrum sp. PV6
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halp03016
]
DOS48_08750
Enzymes [BR:
halp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DOS48_08750
Transfer RNA biogenesis [BR:
halp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DOS48_08750
Prokaryotic type
DOS48_08750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
Pus10_C
PUA
Motif
Other DBs
NCBI-ProteinID:
AZQ14906
LinkDB
All DBs
Position
complement(1784056..1785021)
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AA seq
321 aa
AA seq
DB search
MPKTPDDAAGPATDPLRPAPDERSVPELLRFGVVNVDKPAGPSSHQLSAWLRDAINDTLA
AVDPDGSQIDGVAHAGTLDPKVTGCLPTLTGDATRAAQVFLAGSKEYVSVLELHGSAPAD
IREVIAEFEAEIYQKPPRKSAVTRRLRTRTIHDLDVLAADDRQLLLRIRCESGTYVRKLC
HDIGLAAGVGAHMGHLRRTATDPFDDTDLHTLQDLFDALAWAEGGDEELLRDVVRPAEAA
LVHLPSVTIAPSAARNVATGAPVYAPGVINVEAASGNDSEDADDPLVACYTPDGAVVCLG
RLVGDPDADSGVVVSLERVLV
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagacacccgacgacgccgcaggacccgccaccgacccgcttcgacccgctccc
gacgagcggtcagtccccgaactgctccggttcggcgtcgtcaacgtcgacaagcccgcc
ggcccgtcctcacaccagctttccgcgtggctccgcgacgcgatcaacgacaccctggcg
gcggtcgacccggacggctcccagatcgacggggtcgcgcacgctggcacgctcgatccg
aaggtcaccggctgtctcccgacgctcaccggcgacgccacccgcgccgcacaggtcttc
ttagcggggagcaaagagtacgtctcggtgctggagttgcacggctcggcaccggcggac
atccgcgaggtgatcgcggagttcgaagcggagatctaccagaagccgcctcgaaagagc
gccgtcacccgccggctccgaacgcggacgatccacgacctcgacgtgttagcggccgac
gaccggcagttgctcctccggatccggtgtgagtccgggacgtacgtccgaaagctctgt
cacgacatcggcctcgcggcgggagtcggagcgcacatgggccacctccgacggaccgcg
accgacccgttcgacgacaccgacctgcacaccctccaagacctcttcgacgcgctcgcg
tgggccgagggcggggacgaggagttgcttcgcgacgtggtccgcccggccgaggcggcg
ttggtccacctgccctcggtgaccatcgcgccgtccgccgcgcgcaacgtggccaccggt
gcgcccgtgtacgcgcccggcgtcatcaacgtggaggcggcctcggggaacgactcggag
gacgccgacgaccccctcgtcgcctgttacactcccgacggcgccgtggtctgtctcggg
cgactggtcggggaccccgacgccgactccggcgtcgtcgtctcgctggagcgcgtcctc
gtctga
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