Halorubrum sp. PV6: DOS48_12040
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Entry
DOS48_12040 CDS
T05770
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
halp
Halorubrum sp. PV6
Pathway
halp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
DOS48_12040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halp03019
]
DOS48_12040
03009 Ribosome biogenesis [BR:
halp03009
]
DOS48_12040
04131 Membrane trafficking [BR:
halp04131
]
DOS48_12040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
halp04147
]
DOS48_12040
Messenger RNA biogenesis [BR:
halp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
DOS48_12040
Ribosome biogenesis [BR:
halp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
DOS48_12040
Membrane trafficking [BR:
halp04131
]
SNARE
SNARE associated proteins
Others
DOS48_12040
Autophagy
Aggrephagy
Other aggrephagy associated proteins
DOS48_12040
Exosome [BR:
halp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DOS48_12040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
TIP49
AAA_5
AAA_33
AAA_22
AAA_14
AAA_lid_PRS2_C
NPHP3_N
nSTAND3
RNA_helicase
AAA_28
AAA_7
Mg_chelatase
IstB_IS21
AAA_3
ABC_tran
NB-ARC
DUF815
Sigma54_activat
AAA_17
AAA_18
SLFN-g3_helicase
Parvo_NS1
Vps4_C
AAA_30
TsaE
AAA_24
Zeta_toxin
PhoH
AAA_11
AAA_19
bpMoxR
ATPase_2
Bac_DnaA
Molydop_binding
Zot
Motif
Other DBs
NCBI-ProteinID:
AZQ15505
UniProt:
A0A3Q9ED17
LinkDB
All DBs
Position
complement(2421639..2423906)
Genome browser
AA seq
755 aa
AA seq
DB search
MKLTVRPLKQKDAGRRLAAIDRVAADELGLSGGDIVRVEGANGAAIARVWPGYPEDDGSG
VVRIDGRLRQEANVGIDDRVTVESVDVSRAESVTIAFPSQLRVRGQIAPFIRDKLSGQPV
TEGQTIRTSMGFGLMGGQSQAVPMKVASTTPSGTVVITDDTEISISEVPAEELTERSAPG
DGAGDGPDVAYEDIGGLDGELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKT
LIAKAVANEIDASFHTISGPEIMSKYYGESEEQLRDVFEEASEEAPSIIFMDELDSIAAK
REEAGGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDPALRRGGRFDREIEVGVP
DRDGRKEILQVHTRNMPLVDEIDLDEYAENTHGFVGADLESLAKESAMHALRRIRPEIDL
ESDEIDADVLNSIQVTEDDFKQALKGIEPSALREVFVEVPDVSWDQVGGLEGTKERLRET
IQWPLEYPEVFEELDMQAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFV
GESEKGVREVFSKARENAPTIVFFDEIDSIATERGKNSGDSGVGERVVSQLLTELDGLES
LEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEDARRKILEVHTREKPLADDVDLD
AIARKTEGYVGADIEAVAREASMNASREFIGSVSREDVGESVGNVRVTMQHFEDALDEVN
PSVTPETRERYEEIEKQFRTSEVDRRGDELGPAFQ
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccgtcagaccgctgaaacagaaggacgccgggcgtcgcctcgcggcgata
gaccgcgtcgcggccgacgagctcgggctctccggcggcgacatcgtccgcgtcgagggc
gccaacggggccgccatcgcgcgcgtctggcccggctaccccgaggacgacgggagcggc
gtcgtccgcatcgacggccggctccgccaggaggcgaacgtcggcatcgacgaccgcgtg
accgtcgagtccgtcgacgtctcgcgggcggagtcggtgacgatcgctttcccgagccaa
ctccgcgtccgcgggcagatcgccccgttcatccgcgacaagctctccggacagcccgtg
accgaggggcagacgatccgcacctcgatgggcttcggcctgatgggcggtcagtcgcag
gcggtcccgatgaaggtcgcctcgacgaccccgtcgggaacggtcgtcatcaccgacgac
accgagatttccatctccgaggtgcccgccgaggagctgaccgagcggagcgcccccggc
gacggcgcgggcgacgggcctgacgtggcctacgaggacatcggcgggctcgacggcgaa
ctcgaacaggtccgcgagatgatcgagctcccgatgcggcatccggagctgttcaagcgg
ctcggcatcgacccgccgaagggcgtgctcctccacggcccgccgggcacggggaagacg
ctgatcgcgaaggccgtcgccaacgagatcgacgcgagcttccacaccatctccggcccg
gagatcatgtcgaagtactacggcgagtccgaagagcagctccgtgacgtgttcgaggag
gcctcggaggaggcgccctcgatcatcttcatggacgagctggactcgatcgcggccaaa
cgcgaggaggccggcggcgacgtggagcgccgcgtcgtggcccagctgctctcgctgatg
gacgggctcgaagagcgcggcgaggtcgtcgtcatcggcgcgaccaaccgcgtcgacgcc
atcgaccccgcgctccggcgcggcggccggttcgaccgcgagatcgaagtcggcgtcccc
gaccgcgacggtcgcaaggagatcctgcaggtccacacgcggaacatgccgctcgtcgac
gagatcgacttagacgagtacgcggagaacacccacggcttcgtgggtgcggacttagag
tcgctggcgaaggagtcggcgatgcacgcgctgcggcgcatccgccccgagatcgactta
gagagcgacgagatcgacgctgacgtgttgaactcgatccaggtcaccgaagacgacttc
aaacaggcgctaaaggggatcgaaccctccgcgctccgcgaggtgttcgtcgaggtaccc
gacgtgagctgggaccaggtcggcggcctggaggggacgaaagagcggctccgcgagacg
atccagtggcccctcgagtaccccgaggtgttcgaggagctcgacatgcaggccgccaag
ggcgtcctcatgtacggcccgccgggcacggggaagacgctgctcgcgaaggccgtcgcc
aacgaggcggagtcgaacttcatctcgatcaaggggccggagctgctgaacaagttcgtg
ggcgagtccgagaagggcgtccgcgaggtgttcagtaaggcccgcgagaacgcgccgacg
atcgtgttcttcgacgagatagattcgatcgccaccgagcgcgggaagaactccggcgac
tccggcgtcggcgaacgtgtcgtctcccagctgctgaccgagctcgacgggctcgaatcg
ctggaggacgtggtcgtcatcgcgacgacgaaccggccggacctgatcgactcggcgctg
ctccgccccggccggctcgaccggcatgtccacgtgcccgtgccggacgaggacgcgcgc
cggaagatcctggaggtgcacacgcgcgagaagccgctggcggacgacgtcgacctcgac
gcgatcgcccggaagaccgagggctacgtcggcgccgacatcgaggccgtcgctcgcgag
gcatcgatgaacgcctcgcgggagttcatcggcagcgtctcgcgagaggacgtgggcgag
tccgtcgggaacgtccgcgtgacgatgcagcacttcgaggacgccttagacgaggtgaac
ccgagcgtcactcccgagacgcgcgagcgctacgaggagatcgaaaagcagttccggacg
tcagaggtcgatcgtcggggcgacgagctcggccccgccttccagtag
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