Halorubrum sp. PV6: DOS48_12860
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Entry
DOS48_12860 CDS
T05770
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K09714
HTH-type transcriptional regulator, fmd operon transcriptional regulator
Organism
halp
Halorubrum sp. PV6
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halp03000
]
DOS48_12860
Transcription factors [BR:
halp03000
]
Prokaryotic type
Helix-turn-helix
Other families
DOS48_12860
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFX_C
Sigma70_r4
GerE
HTH_31
Sigma70_r4_2
HTH_23
MarR_2
HTH_3
HTH_7
HTH_IclR
HTH_Crp_2
KorB
DUF7343
MarR
HTH_68
HTH_37
HTH_19
Motif
Other DBs
NCBI-ProteinID:
AZQ15658
UniProt:
A0A3S9LJB2
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All DBs
Position
2573182..2573685
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AA seq
167 aa
AA seq
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MVADDGATGADAAPDPDGVDAATLLERAGFDADESVLTRRQAEVLALRERGLRQSDIADR
LGTSRANVSSVEASARSNVANARETVAFAEALAAPVRVEIEAGTDLYDAPKRVYDACDEA
GVKVNQTAPDLMKTIGERAGDAVHGREVRDRLFVTVDAAGTIRVRRP
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagacgacggagccaccggcgccgatgcggctcccgatcccgacggcgtcgac
gccgcgacgctgttggagcgtgcggggttcgatgccgacgagagcgtgctcacccgccga
caggccgaagtgctggcgctccgcgagcgggggctcaggcagtcggacatcgcggaccga
ctcggcacgtcgcgcgcgaacgtctccagcgtcgaggccagcgcccgcagcaacgtggcg
aacgcccgcgagacggtggcgttcgcggaggcgctcgccgccccggtccgggtggagatc
gaggcgggaaccgacctctacgacgccccgaagcgcgtgtacgacgcctgtgacgaggcc
ggcgtgaaggtgaaccagacggcgccggacctgatgaagacgatcggcgagcgcgccggc
gacgcggttcacggtcgcgaggtccgggaccggctgttcgtgaccgtcgacgccgcgggg
acgattcgggtgcggcggccctga
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