Halorubrum sp. PV6: DOS48_13075
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Entry
DOS48_13075 CDS
T05770
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
halp
Halorubrum sp. PV6
Pathway
halp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DOS48_13075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halp03400
]
DOS48_13075
DNA repair and recombination proteins [BR:
halp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DOS48_13075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
HHH
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AZQ15699
UniProt:
A0A3S9LJF8
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Position
2615240..2617234
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AA seq
664 aa
AA seq
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MELEAIPGVGAKTAASLRELDDPVATVESGDVAAIARAPGVNEARAARIARGAIRRRHGD
DGRVLATDRAREVYRSAIDLLRERTVTDYAAKRLETFYPSAAASRIEEAQAFVESAVERE
PAPAVREALAGVEPLVDPKTVRVRDRCLATADAETLARAESAVPELSVETVDDARDVSEL
ARSYATVIVLDESFAGLDVDGDVHVRPDALENPAETVPERLLAFFAANRERLAAAAAVHE
AADLAPAADLDALRGALDRLDDDGTIVGDAELERLTAAVDDLDAAVSTAESVADDRLRDA
IRERDVTIEGTDFLSLVEQGARVDSLLDRELADEYDAAIERAREHLVDALRLEPDEAELA
ARVFGDDPSFPVEHDETAVSRLRTELSAARDRRAARLKAELATDLGALREPVEELVRDAL
ELDVELAVARFARDFDCVLPDVVGPDAAGAEGGGFRIEGGRSPLLDVDFSEAEPIDYGVS
GATLLSGVNSGGKTSTLDLVALVVVLAQMGMPVPAKSATVERFEEVHYYAKSQGTLDAGA
FEATLRDFGDLVEGADGRLVLVDELESITEPGASAKIIAGILEALDEQDATAVFVSHLAR
EIRDAADFAVAVDGIEAAGLVDGELEVNRSPRKGHLARSTPELIVEKLAGDRDSDFYEAL
LEKF
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggagttagaggcgatccccggcgtcggcgcgaagacggccgcgtcgctccgcgagctc
gacgacccggtggcgaccgtcgaatccggcgacgtggcagcgatcgctcgcgcgccgggc
gtgaacgaggcgcgggccgcccgcatcgcccgcggcgcgatccggcggcgacacggcgac
gacgggcgggtgttggcgaccgatcgcgcccgcgaggtgtaccgctcggcgatcgatctc
ctgcgcgagcgcaccgtcaccgactacgccgcgaagcggctggagacgttctacccgagt
gcggcggcctcgcggatcgaggaggcgcaggcgttcgtcgagtcggcggtcgagcgcgag
cccgctcccgcggtccgggaggcgctcgccggggtcgaacccctcgtcgacccgaagaca
gtccgggtccgcgaccgctgtctcgcgacggccgacgccgagacgctcgcccgcgcggag
tccgcggtgccggagctgtcggtcgagaccgtcgacgatgcccgcgacgtctccgagctg
gcgcggtcgtacgcgaccgtgatcgtcttagacgagtcgttcgccgggctcgacgtggac
ggcgacgtgcacgtccggccggacgcacttgagaacccggccgagaccgtccccgagcgc
ctgctcgcctttttcgccgcgaaccgcgagcggctggcggcggcggcggcggtccacgag
gcggcggacctcgctccggccgccgacctcgacgcgctccgaggcgcgctcgaccggctc
gacgacgacgggacgatcgtcggcgacgcggaactcgaacggctgacggccgccgtcgac
gacttagacgccgcggtgtcgaccgcggagtccgtcgccgacgaccggctgcgcgacgcg
atccgcgagcgcgacgtgaccatcgaggggaccgacttcctctccctcgtcgagcagggc
gcgcgggtcgactcgctgctcgaccgggagctcgcggacgagtacgacgccgcaatcgag
cgcgcccgcgaacacctagtcgacgcgctccggctcgaaccggacgaagcggagctggcc
gcgcgggtcttcggcgacgacccctcgttcccggtcgaacacgacgagaccgcggtgtcg
cggctccgcacggagctttcggcggcgcgcgaccggcgggccgcccgcctgaaagcggag
ctcgcgaccgacctcggcgcgctcagagagccggtcgaggagttggtgcgggacgccctc
gaactcgacgtggagctcgccgtcgcgcggttcgcccgcgacttcgactgcgtgctgccc
gacgtggtcgggccggacgcggcgggggcggaaggcggcgggtttcggatcgagggcggg
cgctccccgctcctcgacgtcgacttcagcgaggccgaaccgatcgactacggggtgtcg
ggcgcgacgctcctctccggcgttaactccggcgggaagacctcgacgctcgatctggtc
gcgctcgtggtcgtcttagcgcagatggggatgcccgttcccgcgaagtcggcgaccgtc
gagcggttcgaagaggtccactactacgcgaaatcgcagggcaccctcgacgcgggcgcg
ttcgaggcgacgctccgggacttcggcgacctcgtcgagggcgcggacgggcggctcgtg
ttggtcgacgaactcgaatcgatcacggagccgggcgcctcggcgaagatcatcgcgggg
atcctcgaagcgctcgacgaacaggacgccaccgccgtcttcgtctcgcacctcgcgcgg
gagatccgcgacgccgccgacttcgcggtcgccgtcgacggcatcgaggcggccgggctc
gtcgacggcgaactcgaggtgaaccgctcgccgcgaaaggggcacctcgcgcggtcgacg
ccggagctcatcgtcgagaaactcgccggcgaccgcgacagcgacttctacgaggcgctg
ttagagaagttctga
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