KEGG   Halorubrum sp. PV6: DOS48_13075
Entry
DOS48_13075       CDS       T05770                                 
Name
(GenBank) endonuclease MutS2
  KO
K07456  DNA mismatch repair protein MutS2
Organism
halp  Halorubrum sp. PV6
Pathway
halp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:halp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    DOS48_13075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:halp03400]
    DOS48_13075
DNA repair and recombination proteins [BR:halp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     DOS48_13075
SSDB
Motif
Pfam: MutS_V HHH_5 HHH AAA_29
Other DBs
NCBI-ProteinID: AZQ15699
UniProt: A0A3S9LJF8
LinkDB
Position
2615240..2617234
AA seq 664 aa
MELEAIPGVGAKTAASLRELDDPVATVESGDVAAIARAPGVNEARAARIARGAIRRRHGD
DGRVLATDRAREVYRSAIDLLRERTVTDYAAKRLETFYPSAAASRIEEAQAFVESAVERE
PAPAVREALAGVEPLVDPKTVRVRDRCLATADAETLARAESAVPELSVETVDDARDVSEL
ARSYATVIVLDESFAGLDVDGDVHVRPDALENPAETVPERLLAFFAANRERLAAAAAVHE
AADLAPAADLDALRGALDRLDDDGTIVGDAELERLTAAVDDLDAAVSTAESVADDRLRDA
IRERDVTIEGTDFLSLVEQGARVDSLLDRELADEYDAAIERAREHLVDALRLEPDEAELA
ARVFGDDPSFPVEHDETAVSRLRTELSAARDRRAARLKAELATDLGALREPVEELVRDAL
ELDVELAVARFARDFDCVLPDVVGPDAAGAEGGGFRIEGGRSPLLDVDFSEAEPIDYGVS
GATLLSGVNSGGKTSTLDLVALVVVLAQMGMPVPAKSATVERFEEVHYYAKSQGTLDAGA
FEATLRDFGDLVEGADGRLVLVDELESITEPGASAKIIAGILEALDEQDATAVFVSHLAR
EIRDAADFAVAVDGIEAAGLVDGELEVNRSPRKGHLARSTPELIVEKLAGDRDSDFYEAL
LEKF
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggagttagaggcgatccccggcgtcggcgcgaagacggccgcgtcgctccgcgagctc
gacgacccggtggcgaccgtcgaatccggcgacgtggcagcgatcgctcgcgcgccgggc
gtgaacgaggcgcgggccgcccgcatcgcccgcggcgcgatccggcggcgacacggcgac
gacgggcgggtgttggcgaccgatcgcgcccgcgaggtgtaccgctcggcgatcgatctc
ctgcgcgagcgcaccgtcaccgactacgccgcgaagcggctggagacgttctacccgagt
gcggcggcctcgcggatcgaggaggcgcaggcgttcgtcgagtcggcggtcgagcgcgag
cccgctcccgcggtccgggaggcgctcgccggggtcgaacccctcgtcgacccgaagaca
gtccgggtccgcgaccgctgtctcgcgacggccgacgccgagacgctcgcccgcgcggag
tccgcggtgccggagctgtcggtcgagaccgtcgacgatgcccgcgacgtctccgagctg
gcgcggtcgtacgcgaccgtgatcgtcttagacgagtcgttcgccgggctcgacgtggac
ggcgacgtgcacgtccggccggacgcacttgagaacccggccgagaccgtccccgagcgc
ctgctcgcctttttcgccgcgaaccgcgagcggctggcggcggcggcggcggtccacgag
gcggcggacctcgctccggccgccgacctcgacgcgctccgaggcgcgctcgaccggctc
gacgacgacgggacgatcgtcggcgacgcggaactcgaacggctgacggccgccgtcgac
gacttagacgccgcggtgtcgaccgcggagtccgtcgccgacgaccggctgcgcgacgcg
atccgcgagcgcgacgtgaccatcgaggggaccgacttcctctccctcgtcgagcagggc
gcgcgggtcgactcgctgctcgaccgggagctcgcggacgagtacgacgccgcaatcgag
cgcgcccgcgaacacctagtcgacgcgctccggctcgaaccggacgaagcggagctggcc
gcgcgggtcttcggcgacgacccctcgttcccggtcgaacacgacgagaccgcggtgtcg
cggctccgcacggagctttcggcggcgcgcgaccggcgggccgcccgcctgaaagcggag
ctcgcgaccgacctcggcgcgctcagagagccggtcgaggagttggtgcgggacgccctc
gaactcgacgtggagctcgccgtcgcgcggttcgcccgcgacttcgactgcgtgctgccc
gacgtggtcgggccggacgcggcgggggcggaaggcggcgggtttcggatcgagggcggg
cgctccccgctcctcgacgtcgacttcagcgaggccgaaccgatcgactacggggtgtcg
ggcgcgacgctcctctccggcgttaactccggcgggaagacctcgacgctcgatctggtc
gcgctcgtggtcgtcttagcgcagatggggatgcccgttcccgcgaagtcggcgaccgtc
gagcggttcgaagaggtccactactacgcgaaatcgcagggcaccctcgacgcgggcgcg
ttcgaggcgacgctccgggacttcggcgacctcgtcgagggcgcggacgggcggctcgtg
ttggtcgacgaactcgaatcgatcacggagccgggcgcctcggcgaagatcatcgcgggg
atcctcgaagcgctcgacgaacaggacgccaccgccgtcttcgtctcgcacctcgcgcgg
gagatccgcgacgccgccgacttcgcggtcgccgtcgacggcatcgaggcggccgggctc
gtcgacggcgaactcgaggtgaaccgctcgccgcgaaaggggcacctcgcgcggtcgacg
ccggagctcatcgtcgagaaactcgccggcgaccgcgacagcgacttctacgaggcgctg
ttagagaagttctga

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