Halorubrum sp. PV6: DOS48_13175
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Entry
DOS48_13175 CDS
T05770
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
halp
Halorubrum sp. PV6
Pathway
halp03022
Basal transcription factors
halp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DOS48_13175
09124 Replication and repair
03420 Nucleotide excision repair
DOS48_13175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halp03021
]
DOS48_13175
03036 Chromosome and associated proteins [BR:
halp03036
]
DOS48_13175
03400 DNA repair and recombination proteins [BR:
halp03400
]
DOS48_13175
Enzymes [BR:
halp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DOS48_13175
Transcription machinery [BR:
halp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DOS48_13175
Chromosome and associated proteins [BR:
halp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DOS48_13175
DNA repair and recombination proteins [BR:
halp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DOS48_13175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
SLFN-g3_helicase
Zot
AAA_25
nSTAND3
AAA_30
GvpD_P-loop
AAA_11
Lipase3_N
PhoH
Com_YlbF
Motif
Other DBs
NCBI-ProteinID:
AZQ15718
LinkDB
All DBs
Position
2641541..2643784
Genome browser
AA seq
747 aa
AA seq
DB search
MSESPHLRFFPYEEPYPNQREAMDRIANALDRGQDVLFEGAPGTGKTLSALVPALEHARE
HDRTVVITTNVHQQMRQFVEDARAITREEPIRAVVFKGKASMCHIGVDYQECQTLRDTTR
EMVETESDVRELEARQRELLAESREGDAGAAEARESVMEELDELEAEIDEYETANVCSHY
RNNLVEDTDEFFGWLFEDVRTPENVYAYADERDLCGYELLKEGMEGVDLVVCNYHHLLDP
NIREQFFRWIDRDPSEILTVFDEAHNIEDAARDHATRTLTENTLDAALEELAESDDSRSE
AAENVVRAFRDALLETYEDALGAGRRESVGENWEDLSIANDDRRDDLTLAFLRNYEGKGI
DTETELAVQLGQALDEEYDRRYRDGETTTRTECQTLQVARFVSTWMAEGTEMGQYPVASV
RRDGATDEVYGRAELYTCIPRRVTEELFDEVAASVLMSATLRPFDVTNDVLGLEDVASLA
YGMGYPESNRRTFAVDTPPLFASERNDPETQETVASLLRDAIRFTPGNTLAFFPSYAEAE
RYYERLGGSTGGDAGAAGAGSRDVGVGGGLAGADLGALYLDGPGEDEEDLRRRVVESDDA
TLFTSLWGTLAEGVSFDGDDARTVVVIGVPYPHLSDRMEAVQAAYDRAFADHDRSRDPGW
AYAVEIPTIRKTRQAIGRVVRGPDDFGVRILADRRYTAADMGKYSVRSAFPPEEREELLD
LQPEKLKFAMLNFYGDHDAYDGPPPEP
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagagtcgccgcatttgcggttcttcccgtacgaggaaccgtatccgaaccagcgc
gaggcgatggataggatcgccaacgcgctggatcgcgggcaggacgtgctgttcgaggga
gcgcccggaacgggaaagaccctctccgcgctcgtgcccgcgctggaacacgcccgcgag
cacgaccgcacggtcgtgatcacgaccaacgttcaccagcagatgcggcagttcgtcgag
gacgcccgcgcgatcacccgcgaagagcccatccgcgcggtcgtatttaaagggaaggca
tcgatgtgtcacatcggcgtcgactaccaggagtgtcagacgctcagggacaccacccgc
gagatggtcgagaccgaaagcgacgtgcgcgaactggaagcccggcagcgcgagctgttg
gccgagagccgcgagggcgacgcgggcgccgccgaggcccgcgaatccgtgatggaggaa
ctcgacgaactcgaagcagaaatcgacgagtacgagaccgcgaacgtctgttcgcactac
cggaacaacctcgtcgaggacacggacgagttcttcggctggctgttcgaggacgttcgc
acccccgagaacgtgtacgcgtacgcggacgagcgcgatctctgtggctacgaactgctc
aaagaggggatggagggcgtcgacctggtggtgtgtaactaccaccacctgctcgacccg
aacatccgcgagcagttcttccggtggatcgaccgcgacccgagcgagattctcaccgtc
ttcgacgaggcgcacaacatcgaggacgccgcgcgcgaccacgccacgcgaacgctgacc
gagaacacgctcgacgccgccttagaggagctcgcggagagcgacgactctcgcagcgag
gcggcggagaacgtcgtccgcgccttccgtgacgccctgctcgaaacgtacgaggacgcg
ctcggcgccggtcgccgcgagtcggtcggcgagaactgggaggatctgtctatcgccaac
gacgaccgccgcgacgacctcacgctcgcctttctccgcaactacgaggggaagggcatc
gacacggagacggaactcgcggtccaactcgggcaggcgttagacgaggagtacgaccgg
cgctaccgcgacggcgagacgacgacccggacggagtgtcagaccctgcaggtcgcccgg
ttcgtctcgacgtggatggcggaggggaccgagatgggccagtacccggtcgcctccgtg
cgccgcgacggcgccaccgacgaggtgtacggccgcgcggagctgtacacctgcatcccg
cgccgcgtcaccgaagaactgttcgacgaggtcgccgcgtcggtgctgatgagcgcgacg
ctccgccccttcgacgtgaccaacgacgtgctcggcctcgaagacgtggcgtcgctggcg
tacgggatgggctaccccgagtcgaaccgccggaccttcgcggtcgacaccccgccgctt
ttcgcctccgagcgaaacgacccggagacccaggagacggtagcgtcgctgctgcgcgac
gcgatccggtttacccccggcaacacgctcgccttcttcccctcctacgccgaggccgag
cgctactacgaacggctgggcgggtcgaccggcggggacgcgggggccgccggcgcgggg
agccgggacgtcggcgtcggcggggggctggccggcgcggacctcggcgcgctctacctc
gacggccccggcgaagacgaggaggacctgcgccggcgggtcgtcgagagcgacgacgcg
accctctttacctccctctggggcaccctcgcggagggggtgagcttcgacggcgacgac
gcgcggacggtcgtcgtcatcggcgtcccgtacccgcacctctccgaccggatggaggcg
gtgcaggcggcgtacgaccgggcgttcgccgaccacgaccgctcccgcgaccccggctgg
gcgtacgccgtcgagatcccgacgatccgcaagacccgacaggcgatcggccgggtcgtt
cgcggcccggacgacttcggcgtccggatcctcgcggaccgccggtacacggcggccgac
atggggaagtactcggttcggagcgcgttcccgccggaagagcgcgaggaactgctcgat
ctacagcccgagaagctgaagttcgcgatgctcaacttctacggcgaccacgacgcctac
gacgggccgccaccggagccgtga
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