Halorubrum sp. PV6: DOS48_13185
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Entry
DOS48_13185 CDS
T05770
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
halp
Halorubrum sp. PV6
Pathway
halp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DOS48_13185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halp03000
]
DOS48_13185
03021 Transcription machinery [BR:
halp03021
]
DOS48_13185
Transcription factors [BR:
halp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
DOS48_13185
Transcription machinery [BR:
halp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
DOS48_13185
RNA polymerase III system
TFIIIB
DOS48_13185
RNA polymerase I system
SL1/TIF-1B
DOS48_13185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
AZQ15720
LinkDB
All DBs
Position
complement(2644239..2644796)
Genome browser
AA seq
185 aa
AA seq
DB search
MADPKETISIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFR
SGKIVCTGANSIDAVHESLDLVFDELRALQIPVDDPEVTVQNIVTSADLGQSLNLNAIAI
GLGLEHIEYEPEQFPGLVYRIDDPDVVALLFGSGKLVVTGGTTPDDAAAAVDVIVEELDG
LGLLA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccgaaggagacgatatcgatagagaatgtcgttgcctccaccgggatcgga
caggagctcgacctccagagcgtcgcgatggatctcgaaggcgccgactacgaccccgag
cagttccccggcctcgtctaccgcaccacggacccgaaatcggccgcgctgatcttccgg
tcggggaagatcgtctgtacgggggccaactcgatcgacgccgtccacgagagcctcgat
ctggtgttcgacgagctccgcgcgctccagatcccggtcgacgacccggaggtcacggtc
cagaacatcgtcacctccgccgacctcggccagagcctcaacctcaacgcgatcgccatc
gggctcgggttagaacacatcgagtacgagccggagcagttccccggcctcgtctaccgg
atcgacgaccccgacgtggtcgcgctgctcttcggcagcggaaagctcgtcgtcaccggc
ggcacgacgccggacgacgccgcggccgccgtcgacgtgatcgttgaggaactcgacggt
ctcggcctgctggcgtga
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