KEGG   Halorubrum sp. PV6: DOS48_13295
Entry
DOS48_13295       CDS       T05770                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
halp  Halorubrum sp. PV6
Pathway
halp03030  DNA replication
halp03410  Base excision repair
halp03420  Nucleotide excision repair
halp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:halp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DOS48_13295
   03410 Base excision repair
    DOS48_13295
   03420 Nucleotide excision repair
    DOS48_13295
   03430 Mismatch repair
    DOS48_13295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:halp03032]
    DOS48_13295
   03400 DNA repair and recombination proteins [BR:halp03400]
    DOS48_13295
DNA replication proteins [BR:halp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DOS48_13295
DNA repair and recombination proteins [BR:halp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DOS48_13295
   MMR (mismatch excision repair)
    Other MMR factors
     DOS48_13295
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    DOS48_13295
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: AZQ15741
UniProt: A0A3S9LJJ3
LinkDB
Position
complement(2668238..2668981)
AA seq 247 aa
MFKAIVGASTLQDALDSVSVLVDECKIRLNDEEFSIRAVDPANVGMVDLTLEAAAFESYE
ADGGVIGVNLARLEDIAGMANSGDLIHLELDEETRKLHIEIDGLSYTLALIDPDSIRQEP
DIPDLDLASEIVVEGAQIDRGIKAADMVSDHIRLRVDESDEAFFIEAEGDTDDVDLRLAR
EDLIALTAGPADSLFSLDYLKDMNKAIPSDAEVTIELGEEFPVKLHYGFAEGLGNVTFML
APRIQSD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggccatcgtgggcgcgtcgacgctacaggacgcgctcgactcggtgagcgtg
ttggtcgacgagtgtaagatccgactgaacgacgaggagttctccatccgggccgtcgac
cccgccaacgtcggcatggtcgatctcacgctcgaagccgccgcgttcgagtcctacgag
gccgacggcggcgtcatcggtgtcaacctcgcccgcctcgaagacatcgccggcatggcc
aactccggcgacctgatccacctcgaactcgacgaggagacccgcaaactccacatcgag
atcgacgggctctcctacaccctcgcgcttatcgaccccgactccatccggcaggagccg
gacatcccggacctcgatctcgcctccgagatcgtcgtcgagggcgcgcagatcgaccgc
gggatcaaggccgccgacatggtctctgaccacatccgcctccgcgtcgacgagagcgac
gaggcgttcttcatcgaggccgagggcgacaccgacgacgtcgacctgcggctcgcccgc
gaggacctcatcgcgctcaccgccggccccgccgactcgcttttcagcctcgattacctg
aaagacatgaacaaggcgatcccctccgacgccgaggtcaccatcgaactcggcgaggag
ttccccgtcaagctccactacggcttcgccgaggggctcggaaacgtgaccttcatgctc
gcgcctcgtatccagagcgactga

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