Halorubrum sp. PV6: DOS48_13560
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Entry
DOS48_13560 CDS
T05770
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
halp
Halorubrum sp. PV6
Pathway
halp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DOS48_13560 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halp03400
]
DOS48_13560 (uvrC)
DNA repair and recombination proteins [BR:
halp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DOS48_13560 (uvrC)
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Ortholog
Paralog
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG_UvrC
UvrC_M
UvrC_RNaseH
HHH_5
HHH_2
HHH
UVR
GIY-YIG
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AZQ15788
LinkDB
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Position
complement(2721918..2723696)
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AA seq
592 aa
AA seq
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MDADAVRERAGDLPAEPGVYQFRAGETTLYVGKAVDLRDRVRSYADPRSGRIRGMVGRAD
HIEFAVTDTETQALLLEANLIKRLQPRYNVRLKDDKSYPLVAFTDHPVPRIEVTRDPAEG
AVAYGPFTNKGRVEAVIKAIRDEFRLRGCSDHKYANRDRPCLDYEMGICSAPCTGEIDPE
AYADDVAAARRFFEGETGVLADPLRRRMEAAAEQAEFERAANLRDRLRAVEAFHGEGGEA
VSDRRDDRTVDVLAAAVEGDVARVARLHSERGQLVDRSRHRLDAAAAGEGSEDRDSSPAD
PDANTPAAVLSAFLSQYYAEREFPEAVLLAERPADPDVVDWLEAEGVSVRVPGAGREAKL
VELALKNARKRGGRDDPVGALGERLGIDRPARIEGFDVSHAQGTAVVGSNVCFVDGSAET
SDYRRKKLTERNDDYANMRELVRWRADRAVAGTDDRPDPDLLLIDGGEGQLGAAGDALAE
TGWDVPVVALAKAEELVVTPTGTRRWDDGASELHLLQRVRDEAHRFAVSYHQTVRDEVKT
VLDDVPGVGPQTRRRLLRRFGSVDSVRSASRDDLTDVDGVGDATARSLRERL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgacgccgtgcgcgagcgggccggggacctccccgcggagcccggcgtctac
cagttccgcgccggcgagacgacgctgtacgtcggcaaggcggtcgacctgcgcgaccgc
gtcaggtcgtacgccgacccccgctccggccggatccgggggatggtcggccgcgccgac
cacatcgagttcgcggtcaccgacaccgagacgcaggcgctgttgttggaggcgaacctg
atcaaacggctccagccgcgctacaacgtccggttaaaggacgacaagtcgtacccgctc
gtcgcgttcaccgaccaccccgtcccccggatcgaagtgacccgcgaccccgccgagggc
gcggtcgcgtacggcccgttcacgaacaaggggcgcgtcgaggcggtgatcaaagcgatc
cgcgacgagttccggctccgcggctgctcggaccacaagtacgcgaaccgggaccgcccc
tgtctcgactacgagatgggcatctgttcggcgccctgcaccggcgaaatcgaccccgag
gcctacgccgacgacgtcgcggccgcccgccggttcttcgagggcgagacgggcgtcctc
gccgaccccctccggcgccggatggaggccgccgccgagcaggcggagttcgagcgcgcc
gcgaacctccgggaccgcctccgggccgtggaggccttccacggcgagggcggcgaggcc
gtgagcgaccggcgcgacgaccgcaccgtcgacgtgctcgccgccgccgtcgagggcgac
gtcgctcgcgtggcccggctccacagcgagcgcggccagctggtcgaccggagccggcac
cgcctagacgccgcggcggcgggcgaggggagcgaggaccgcgattcgtccccggctgac
cccgacgccaacacccccgccgccgtgctgtcggcgttcctctcgcagtactacgccgag
cgcgagttccccgaggcggtgctgctcgccgagcgcccggccgacccggacgtggtcgac
tggctggaggcggagggcgtctcggtccgcgttcccggcgcgggccgggaggcaaaactc
gtcgaactcgcgctgaaaaacgcccgcaagcgcgggggtcgcgacgacccggtcggcgcg
ctcggcgagcggctcggcatcgaccgccccgcccggatcgaggggttcgacgtgagccac
gcgcagggcaccgcggtggtcggctcgaacgtctgtttcgtcgacgggagcgcggagacc
agcgactatcgtcggaaaaaactcaccgagcgcaacgacgactacgcgaacatgcgcgag
ctggtccggtggcgggccgaccgcgcggtcgccggcacggacgaccggcccgaccccgat
ctgctcctcatcgacggaggcgaggggcagctcggggccgccggcgacgcgctcgcggag
accggttgggacgtgccggtcgtcgccttggcgaaggccgaggagctggtcgtcaccccg
accggcacccggcggtgggacgacggggcgtccgaactgcacctgctccagcgcgtccgc
gacgaggcgcaccgcttcgccgtttcctaccaccagaccgtccgcgacgaggtcaagacg
gtcctcgacgacgtgccgggcgtcgggccgcagacccgccgccgactcctgcgtcggttc
ggctccgtcgacagcgtccggtcggcctcccgcgacgacctcaccgacgtcgacggcgtc
ggcgacgcgaccgcccggtcgctccgcgagcgcttataa
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