KEGG   Halorubrum sp. PV6: DOS48_13560
Entry
DOS48_13560       CDS       T05770                                 
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
halp  Halorubrum sp. PV6
Pathway
halp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:halp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DOS48_13560 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:halp03400]
    DOS48_13560 (uvrC)
DNA repair and recombination proteins [BR:halp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DOS48_13560 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG_UvrC UvrC_M UvrC_RNaseH HHH_5 HHH_2 HHH UVR GIY-YIG 5_3_exonuc
Other DBs
NCBI-ProteinID: AZQ15788
LinkDB
Position
complement(2721918..2723696)
AA seq 592 aa
MDADAVRERAGDLPAEPGVYQFRAGETTLYVGKAVDLRDRVRSYADPRSGRIRGMVGRAD
HIEFAVTDTETQALLLEANLIKRLQPRYNVRLKDDKSYPLVAFTDHPVPRIEVTRDPAEG
AVAYGPFTNKGRVEAVIKAIRDEFRLRGCSDHKYANRDRPCLDYEMGICSAPCTGEIDPE
AYADDVAAARRFFEGETGVLADPLRRRMEAAAEQAEFERAANLRDRLRAVEAFHGEGGEA
VSDRRDDRTVDVLAAAVEGDVARVARLHSERGQLVDRSRHRLDAAAAGEGSEDRDSSPAD
PDANTPAAVLSAFLSQYYAEREFPEAVLLAERPADPDVVDWLEAEGVSVRVPGAGREAKL
VELALKNARKRGGRDDPVGALGERLGIDRPARIEGFDVSHAQGTAVVGSNVCFVDGSAET
SDYRRKKLTERNDDYANMRELVRWRADRAVAGTDDRPDPDLLLIDGGEGQLGAAGDALAE
TGWDVPVVALAKAEELVVTPTGTRRWDDGASELHLLQRVRDEAHRFAVSYHQTVRDEVKT
VLDDVPGVGPQTRRRLLRRFGSVDSVRSASRDDLTDVDGVGDATARSLRERL
NT seq 1779 nt   +upstreamnt  +downstreamnt
atggacgccgacgccgtgcgcgagcgggccggggacctccccgcggagcccggcgtctac
cagttccgcgccggcgagacgacgctgtacgtcggcaaggcggtcgacctgcgcgaccgc
gtcaggtcgtacgccgacccccgctccggccggatccgggggatggtcggccgcgccgac
cacatcgagttcgcggtcaccgacaccgagacgcaggcgctgttgttggaggcgaacctg
atcaaacggctccagccgcgctacaacgtccggttaaaggacgacaagtcgtacccgctc
gtcgcgttcaccgaccaccccgtcccccggatcgaagtgacccgcgaccccgccgagggc
gcggtcgcgtacggcccgttcacgaacaaggggcgcgtcgaggcggtgatcaaagcgatc
cgcgacgagttccggctccgcggctgctcggaccacaagtacgcgaaccgggaccgcccc
tgtctcgactacgagatgggcatctgttcggcgccctgcaccggcgaaatcgaccccgag
gcctacgccgacgacgtcgcggccgcccgccggttcttcgagggcgagacgggcgtcctc
gccgaccccctccggcgccggatggaggccgccgccgagcaggcggagttcgagcgcgcc
gcgaacctccgggaccgcctccgggccgtggaggccttccacggcgagggcggcgaggcc
gtgagcgaccggcgcgacgaccgcaccgtcgacgtgctcgccgccgccgtcgagggcgac
gtcgctcgcgtggcccggctccacagcgagcgcggccagctggtcgaccggagccggcac
cgcctagacgccgcggcggcgggcgaggggagcgaggaccgcgattcgtccccggctgac
cccgacgccaacacccccgccgccgtgctgtcggcgttcctctcgcagtactacgccgag
cgcgagttccccgaggcggtgctgctcgccgagcgcccggccgacccggacgtggtcgac
tggctggaggcggagggcgtctcggtccgcgttcccggcgcgggccgggaggcaaaactc
gtcgaactcgcgctgaaaaacgcccgcaagcgcgggggtcgcgacgacccggtcggcgcg
ctcggcgagcggctcggcatcgaccgccccgcccggatcgaggggttcgacgtgagccac
gcgcagggcaccgcggtggtcggctcgaacgtctgtttcgtcgacgggagcgcggagacc
agcgactatcgtcggaaaaaactcaccgagcgcaacgacgactacgcgaacatgcgcgag
ctggtccggtggcgggccgaccgcgcggtcgccggcacggacgaccggcccgaccccgat
ctgctcctcatcgacggaggcgaggggcagctcggggccgccggcgacgcgctcgcggag
accggttgggacgtgccggtcgtcgccttggcgaaggccgaggagctggtcgtcaccccg
accggcacccggcggtgggacgacggggcgtccgaactgcacctgctccagcgcgtccgc
gacgaggcgcaccgcttcgccgtttcctaccaccagaccgtccgcgacgaggtcaagacg
gtcctcgacgacgtgccgggcgtcgggccgcagacccgccgccgactcctgcgtcggttc
ggctccgtcgacagcgtccggtcggcctcccgcgacgacctcaccgacgtcgacggcgtc
ggcgacgcgaccgcccggtcgctccgcgagcgcttataa

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