Halorubrum sp. PV6: DOS48_14515
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Entry
DOS48_14515 CDS
T05770
Name
(GenBank) DNA helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
halp
Halorubrum sp. PV6
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halp03400
]
DOS48_14515
Enzymes [BR:
halp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DOS48_14515
DNA repair and recombination proteins [BR:
halp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DOS48_14515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
UvrD_C_2
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AZQ16075
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All DBs
Position
pHrrPV6:complement(168415..171939)
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AA seq
1174 aa
AA seq
DB search
MSNNNDPRTLRNAQATIRDRFVDAESGLFAMNCVAGAGKSMTVQRIAAETIIRRYASGDR
TPVQSVAVMSFNTDEAAAIGPAVCEHIREIVTHELIPEAASLTETDVAYLVTRVRHAPFI
GTVDSVLRDVFDELATDLGFEETPTVGNEALLETVHKACYDAVASDPSHADAIAELEAAY
LDDGWSATPEEMLADAVQYCRDQRLSTAAFERKLHTTQGAVYPEGRTTSRADIVATIADV
VDADAAADTDETLSAAEWDDLVAADQRLYDAWEKTLTAFSEVLEAYREQYRALIREYGVV
SHTDVAFFITSVFKRDWPVDGDGPTTDQHTALRQRYHARLDSVIIDEAQDISTIQHAALS
QLVAPSMRVLACGDALQSIYGWRHADPSLFTSACRNGQYLGIDWDTHATVTAATTYRGTP
DIATGINTIMRPVFEDPARGGLSDFEATYPGLDASRDPTVDPSIHIAAFTGGTAPDTAQW
VNPDGRAGEANILATYLTQGLADGTLTDETGSPQSITVVFRKRTRMDAYKDAFEAAGLTV
QNASSRLFACPVVKAVLAVCDWLTAPTDRAQTRALLTDSPFDFAPFHDRFERAGYDLDAI
CAADDLDADTRDVLCGLRDLRDQLGRFHRVPASVYLEDIIEQLGLRADPGDQFTELPTAQ
RVAALDALTNTVEEWETDSQYPPSDLGDLLAPFRAAPRKGPDIPSVTDDADVVFSTVHRL
KGDQDDVIVLATPGFKLWDTGPFSQRFITQGDVAALAPPTNVETAPDIALPPFDGGLYTP
SGGGRERQGVASRDVGLRWASEHWLDDAAGGPPHLLGPEHLQSVAANMRGEAWRLLYVAL
SRARDHLVIPLPKRLPGTAQPRDRWLDTLDETLGFSPGRTATYAIDEPSSAGELTIGVND
VDGGATRVTPDTPRSLTSAVPPRRDQLASWVPRFLDPSSAYPLTEDVDGTVGAHLLDEAI
HTDTEAVADSLPIMFETLGPEAVGTCLHEAVLTLIEMDVPDTEIDAWSKPVQSALQHAME
QITPQSIEMLPDTERGGLVSFFHNSVVSAFLASDLWAQIQAAEAVYVDHDLSGLVTAGEV
EVEVHGEADILIDMGGGEWQLADLKIALTDDVDATKPRYELQIAAYEHILRQELGPAATI
HTSVETFGCVRKSVHGQFPPAVLARRIRTLIWTA
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaacaacgatccacgcacgcttcggaacgcacaggcaacgatcagggaccgc
ttcgtcgacgccgagtcggggctgttcgcgatgaactgtgtcgccggcgctggcaaatcg
atgacggtccagcgaattgcggcggaaaccatcattcggcggtacgccagcggcgatcgg
acacccgtccagagcgtggccgtcatgtcgttcaacaccgacgaggcggccgcaatcgga
ccggcggtctgtgagcacattcgggagatcgtcacccacgagttgatacccgaagcggcg
tcactcaccgagacagatgtcgcgtatcttgtgacgcgggtccggcacgcgccgtttatc
ggcactgtcgacagcgtgttgcgtgatgtcttcgacgagttagccaccgatctcgggttc
gaggagacgccaacagttgggaatgaggcgttgctggaaacggtgcacaaagcgtgttac
gacgccgtcgcgagcgatccgtcccacgcggatgcgatcgccgagctggaagcggcatat
ctggatgatggctggtcagccactcccgaggagatgcttgctgatgccgttcagtactgt
cgcgatcagcggctctcgacagcagcgttcgaacgcaaactgcacaccacacagggggcg
gtgtaccctgagggacgcaccaccagccgtgcggatatcgtggcgacgatcgcggatgtc
gtcgacgccgacgccgcagccgacaccgacgaaaccctctcagcagcggagtgggacgac
cttgtagctgctgaccagcggctctacgacgcgtgggagaagacgctgacggcgtttagt
gaggtcctcgaggcatatcgcgagcagtaccgagccctgatccgcgagtatggtgtggtc
tctcacaccgatgtcgccttctttatcaccagtgtgttcaagcgtgactggccagtcgat
ggcgacgggccgaccaccgaccagcacacagcccttcgtcagcggtaccacgcgcgcctc
gacagcgtgatcatcgacgaagcacaggatatctccaccatccaacacgcggcgctatcc
cagcttgtcgccccctcaatgcgcgtcctcgcgtgcggagatgcactccaaagcatctac
ggctggcgacacgccgacccgtcgctgttcacgagcgcctgtcgcaatggacagtatctc
gggatcgactgggacacccatgcgacggtgacggccgcgacgacctaccgggggacccca
gacatcgccaccggcatcaacacgatcatgcggcccgtctttgaggacccggcgcggggt
ggactcagcgacttcgaggcgacgtaccccggcctcgacgcatctcgggatccaaccgtc
gacccgagcatccacatcgccgcgttcaccggtgggacagcacccgacacggcacagtgg
gtcaaccccgacgggcgtgctggcgaggcgaacatccttgcgacatacctcacacaggga
ctcgctgatgggacgttgactgacgagaccgggtcgccacagtcgataaccgtcgttttt
cggaagcgaacgcggatggatgcgtacaaagacgcgttcgaggccgcgggcttgaccgtg
caaaacgcgagttcgcggctttttgcgtgtcccgtggtcaaggcggtgcttgctgtctgt
gactggctcactgcgccaaccgatcgggcccagacacgcgcgttgttgacggattcgccg
ttcgactttgcgccgtttcacgaccggttcgagcgggctgggtacgacctcgacgccatc
tgtgcagccgacgacctcgacgccgacacgcgggacgttctctgtggcctgcgcgatctt
cgcgatcagctggggcggtttcaccgcgttcctgcatcggtgtatctcgaagacatcatc
gagcagcttggacttcgagctgacccgggcgaccagttcaccgagctgccgacagcacaa
cgggtggccgcgctcgacgcgctcacgaacactgtcgaagagtgggaaactgacagtcag
tatccaccgagcgacctcggtgacctgcttgcgccgtttcgggcagccccgcgcaaggga
ccagatatcccgagtgtgaccgacgatgccgacgtcgtcttcagtacggtccaccggctc
aaaggggatcaagacgacgtgattgtgcttgcaacgccggggttcaagctttgggacaca
ggcccgttctcccagcggttcatcacgcagggtgacgttgcggcgttggccccgccgaca
aacgtcgagacagcacccgatatcgcactgccaccattcgatgggggcctctacacgcca
agcggtggcggtcgagagagacaaggcgtcgcatcacgcgatgtcgggttgcgatgggcg
agcgagcactggctcgacgacgctgccggtgggcccccgcacctgcttgggcccgagcat
ctccagtctgtggcggccaatatgcgaggggaagcatggcgattactgtatgtggcgctc
tctcgggcgcgtgaccatctcgtcatcccgcttccgaagagactgcccggcacagcccag
ccgcgtgaccgctggctcgatacgctggatgagacactcgggttttcgcccggacggaca
gccacgtacgcgatcgacgagccgtccagtgccggcgagctcacgatcggggtgaatgac
gtcgacggcggtgcgacgcgcgtgacgcccgacacgccgcgatcgctgacgagtgccgtc
ccgcctcggcgcgaccagttggcgtcgtgggtcccacgttttctcgacccgagttcggcc
tatccgctgactgaagatgtcgacgggaccgtgggtgcccaccttctcgacgaggccatt
cacaccgacactgaggcggtggccgacagcctcccaatcatgttcgagacacttggacca
gaggcagtcggaacctgcctccacgaggcagtactcacccttatcgagatggacgtgcca
gacaccgagatcgatgcgtggagcaagccggtccaaagcgcgcttcagcacgcgatggaa
cagataacgccgcagtcgatcgagatgctgccagatactgaacgtggtggcctcgtcagc
ttcttccacaactcggtcgtgtcggccttcctcgcgtccgacctgtgggcccagatccaa
gcagcagaagctgtctatgtcgaccacgatttgagtggactcgtgactgctggagaggtt
gaggttgaagtccatggtgaggccgatatcctcatcgatatgggtggtggggagtggcag
ctggccgatctcaaaattgcgctgactgacgatgtcgacgcaacgaaaccgcggtacgaa
ctccagatcgccgcctacgaacacatcctccgccaagagcttggcccggcagcgacaatt
cacaccagtgtcgagacgttcgggtgtgtccgaaagtcagtgcatggacagtttccgcca
gcggttcttgcacgccggattcggaccctcatttggaccgcttga
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