Halorubrum sp. CBA1229: Hrr1229_002935
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Entry
Hrr1229_002935 CDS
T06658
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
halq
Halorubrum sp. CBA1229
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halq03016
]
Hrr1229_002935 (truD)
Enzymes [BR:
halq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Hrr1229_002935 (truD)
Transfer RNA biogenesis [BR:
halq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hrr1229_002935 (truD)
Prokaryotic type
Hrr1229_002935 (truD)
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Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QKY15878
UniProt:
A0A7D4Y0G2
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All DBs
Position
complement(585941..587449)
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AA seq
502 aa
AA seq
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MASEHALREAHPTERAVGMAYYATDAEGIGGRLRESPDDFRVRELEAFDPEPFGADRGSY
PELVVRVTLRDWDTNDFARRISDALGISRERVSWAGTKDKRAVTTQLFTLREVDPDELPA
IRGADIEPLGRAGRRLSFGDLAGNAFEIRVADAVEEAPERVADAVRDLRAFAGSEGGDDA
EATAGDLATDATVGVPNYFGQQRFGSRRPVTHVVGLAIARNDPREAVRLYAGNPAETEPD
DTRAARDRVDAAFGVDADVAGEGVTGGGTAAGAERSAADGTGDGDWGACLDAIPGKLRFE
RSMVHRLADRGVAPDAPPDHDDWWHALEAVPSNLQRLFVNAAQSFLFNRIASERLRRGLP
FDRPVAGDVVCFADADAPDELYAPDTDRLQRVDADRVSVVSRHCERGRAFVTAPLVGTET
ELGDGEPGEIEREVLADAGIEPGDFALPGEFDSAGTRRAVLLRTDLDVTFADGDPRFAFA
LPSGSYATALLREFLKQGPLDL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgagcacgccctccgcgaggcgcacccgaccgagcgcgcggtcggcatggcg
tactacgccaccgacgctgaagggatcggcggccgactgcgggagtcccccgacgacttc
cgggtccgcgagctggaggcgttcgatccggagccgttcggggccgaccgcgggagctac
cccgagctggtcgtccgcgtcacgctgcgcgactgggacacgaacgacttcgcacgccgg
atctcggacgcgctcggaatcagccgcgagcgcgtctcctgggccgggacgaaggacaaa
cgggcggtcaccacgcagctgttcacgctccgcgaggtcgaccccgacgagctccccgcg
atccgcggcgccgacatcgagccgctcggtcgggccggccggcggctctccttcggcgac
ctcgccggcaacgccttcgagatccgggtcgccgacgcggtcgaggaggcccccgaacgc
gtcgccgacgcggtgcgcgacctccgggcgttcgcgggcagcgagggaggcgacgacgcg
gaagcgacggctggcgacctcgcaaccgacgcgaccgtcggcgtcccgaactacttcggc
cagcagcgcttcggcagccggcggcccgtcacccacgtcgtcgggctcgcgatcgctcgg
aacgacccgcgcgaggcggtccggctgtacgcgggcaatcccgcggagacggagccggac
gacacccgggccgcgcgcgaccgcgtcgacgccgcgttcggggtggacgccgacgtcgcc
ggcgagggcgtcaccggcgggggaaccgccgccggcgccgagcgctccgccgccgacggc
accggcgacggcgactggggcgcctgcctcgacgcgatcccgggcaagctccggttcgag
cgctcgatggtccaccggctcgccgaccgcggcgtcgcccccgacgcgccgcccgatcac
gacgactggtggcacgcgctggaggcggtgccgtcgaacctccagcgactgttcgtcaac
gccgcccagtcgttcctcttcaaccggatcgccagcgagcggctccgccgcgggctcccc
ttcgatcgccccgtcgccggcgacgtggtctgtttcgccgacgccgacgccccggacgag
ctgtacgcgccggacacggaccggctccagcgggtcgacgccgaccgcgtctcggtcgtc
tcgcgccactgcgagcgcgggcgggcgttcgtcaccgccccgctcgtcggcacggagacc
gagctcggcgacggcgagcccggcgagatcgagcgcgaggtcctcgcggacgcggggatc
gaaccgggcgacttcgcgctcccaggggagttcgactccgcgggcacccggcgggcggtc
ctcctgcggaccgacctcgacgtgacgttcgcggacggcgacccgcggttcgcgttcgcg
ctcccgagcggctcgtacgcgaccgcgctgctccgggagttcctcaagcaaggaccgctc
gacctgtga
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