Halorubrum sp. CBA1229: Hrr1229_003255
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Entry
Hrr1229_003255 CDS
T06658
Name
(GenBank) sugar ABC transporter permease
KO
K15771
arabinogalactan oligomer / maltooligosaccharide transport system permease protein
Organism
halq
Halorubrum sp. CBA1229
Pathway
halq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hrr1229_003255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
halq02000
]
Hrr1229_003255
Transporters [BR:
halq02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
Hrr1229_003255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QKY15939
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Position
652313..653308
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AA seq
331 aa
AA seq
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MASPHTGTGASGLARLRAAVPFSNRDWGLLLVIPGVVLFSSFMLYPIVYLFYISLTDATF
AGSVIGGGAELIGLENYVQLLGDSQFWTSMSTTWLFVAVSLVIKVFVAVGIALLLNHARV
VGKRYMRAAVIVPLGFPGIFTITVWRGMFSDARFGVFNTILGRYNGVMSSLPAPEFLLFD
VPIGFLSGRWEAFFAYVTTEVWLAYPFMVIIIVSALQDVPRELHEAAMVDGAGPLQRFRT
VTLPAIKRPVLFASILTGATSFQQFLIPWVFNQGGPARQNELIIVYGYREAISFNEFGLS
AAILIVAIAVIGLFMYAAVRYGGLAEGVGDE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccacacaccggtaccggcgcgagcggcctagcgcggctccgagcagcggtc
ccgttctctaaccgcgactggggactgctgctcgttatccccggcgtggtcctgttctcc
agcttcatgctgtacccgatcgtctacctgttctacatctcgctgaccgacgcgacgttc
gccgggtcggtgatcgggggcggcgccgagctgatcgggctggagaactacgtgcagctg
ctcggcgactcgcagttctggacgtcgatgtcgacgacgtggctgttcgtcgccgtctcg
ctcgtgatcaaggtgttcgtcgccgtcggcatcgcgctcctgttgaaccacgcccgcgtc
gtcggcaagcgctacatgcgcgcggcggtgatcgtgccgctcgggttccccgggatcttc
acgatcaccgtctggcgcgggatgttcagcgacgcccgattcggcgtgttcaacacgatc
ctcggacggtacaacggcgtcatgtcgtcgctgccggcgccagagttcctccttttcgac
gtcccgatcggcttcctcagcggccgctgggaggcgttcttcgcgtacgtcaccacggag
gtgtggctggcgtacccgttcatggtgatcatcatcgtgagcgcgctccaggacgtcccg
cgcgagctccacgaggcggcgatggtcgacggggcgggaccccttcagcggttccgcacc
gtgacgctgcccgcgatcaagcggccggtgctgttcgcgtcgatcctcaccggcgcgacc
tcgttccagcagttcctgatcccgtgggtgttcaaccaggggggcccggcgcggcagaac
gagctgatcatcgtgtacggctaccgcgaggcgatcagcttcaacgagttcgggctctcg
gccgcgatcctcatcgtcgcgatcgccgtcatcggcctcttcatgtacgccgccgtgcgc
tacggcggcctcgccgagggggtgggtgacgaatga
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