Halorubrum sp. CBA1229: Hrr1229_003505
Help
Entry
Hrr1229_003505 CDS
T06658
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
halq
Halorubrum sp. CBA1229
Pathway
halq00300
Lysine biosynthesis
halq00470
D-Amino acid metabolism
halq01100
Metabolic pathways
halq01110
Biosynthesis of secondary metabolites
halq01120
Microbial metabolism in diverse environments
halq01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Hrr1229_003505 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Hrr1229_003505 (lysA)
Enzymes [BR:
halq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Hrr1229_003505 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
RedAm-like_C
Motif
Other DBs
NCBI-ProteinID:
QKY15989
UniProt:
A0A7D5CVZ3
LinkDB
All DBs
Position
complement(699709..701085)
Genome browser
AA seq
458 aa
AA seq
DB search
MSDRDAGPAADAGVDTADGNPPVRRVSDWDADRLADLAAEHGTPLYVQDLDRVRENCERL
RDAFPDADVRYAVKAHTGRAVLEAVREAGLDAECASAGEVDRALAAGFGGDRLHYTAVNP
PARDLDYVVGVTEAEPDLTVTVGAVDTLDRLAERGYDGRVCLRVNPGVGAGHHEKVRTGG
AAKFGVPYDRAAEAAREAAERFDAVGIHAHAGSGIDPDQLDSHREMVARMGELARELTDP
SDDAAPLDLEYVDVGGGFGVPYKEDEPPLDLSAVAEATREAVAPLPAGVDLAIEPGRYVV
ADAGVLLTRVNTVKPTPEERVVGADAGMTDLLRPAMYDAYHPIRNLGGGRGGDGGDAPAP
DEREATPVTVAGPICETGDTLCRDRALADPARGDLLAVGVAGAYGYEMASQYNSRPRPAE
VALDDGTATIARRRERLADLTAVEREAETPTGPTGGDR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccgcgacgcgggaccggcggccgacgccggcgtcgacaccgccgacggcaac
cccccggtccggcgcgtgagcgactgggacgccgaccggctcgccgacctcgcggccgag
cacggcacgcccctctacgtgcaggacctcgaccgcgtgcgcgagaactgcgagcgcctg
cgcgacgccttcccggacgccgacgtccggtacgccgtgaaggcccacaccggacgggcg
gtcctcgaagcggtccgcgaggccgggctcgacgccgagtgcgcctcggcgggcgaggtc
gaccgcgcgctcgcggccggcttcggcggcgaccggctccactacaccgcggtcaacccg
cccgcccgcgacctcgactacgtcgtcggcgtcaccgaggcggagcccgacctgacggtc
accgtcggcgcggtcgacaccctcgaccgcctcgccgagcgcggctacgacggccgggtc
tgcctccgggtgaaccccggcgtcggcgcgggccaccacgagaaggtccggaccggcggc
gcggcgaagttcggggtcccgtacgaccgcgccgcggaggcggcccgcgaggccgccgag
cgcttcgacgccgtcgggatccacgcccacgccggctccggtatcgaccccgaccagctc
gacagccaccgcgagatggtcgctcggatgggcgagctggcgcgcgaactgaccgacccg
agtgacgatgccgctcctctcgacctcgagtacgtcgacgtcggcggcgggttcggcgtc
ccttataaagaggacgagccgccgctcgacctctcggcggtcgccgaggcgacccgcgag
gccgtcgcgccgctccccgcgggcgtcgacctcgcgatcgagcccggccggtacgtcgtc
gccgacgcgggcgtcctcctgacgcgcgtgaacacggtgaaaccgactccggaggagcgg
gtcgtcggcgccgatgccggcatgacggacctgctccggccggcgatgtacgacgcgtac
cacccgatccgcaacctcggcggcggacggggcggcgacgggggcgacgccccggccccc
gacgagcgggaggcaacccctgtcacagtcgccggacctatctgtgagaccggcgatacc
ctctgtagagaccgagcgctcgccgacccggcacgcggggacctcctcgcggtcggtgtc
gcgggcgcgtacggatacgagatggcgagccaatacaactcacgaccgcgaccggcggag
gtcgcgctcgacgacggaaccgcgacgatagcccggcgccgggagcgcctcgccgacctg
acggcggtcgagcgggaggccgagacgccgaccggaccgacggggggcgaccgatga
DBGET
integrated database retrieval system