KEGG   Halorubrum sp. CBA1229: Hrr1229_003805
Entry
Hrr1229_003805    CDS       T06658                                 
Symbol
polX
Name
(GenBank) DNA polymerase/3'-5' exonuclease PolX
  KO
K02347  DNA polymerase (family X)
Organism
halq  Halorubrum sp. CBA1229
Brite
KEGG Orthology (KO) [BR:halq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:halq03400]
    Hrr1229_003805 (polX)
DNA repair and recombination proteins [BR:halq03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    Hrr1229_003805 (polX)
SSDB
Motif
Pfam: DNA_pol_B_thumb HHH_8 HHH_5 PHP DNA_pol_B_palm HHH DNA_pol_lambd_f HHH_2
Other DBs
NCBI-ProteinID: QKY16047
UniProt: A0A7D5CFE0
LinkDB
Position
complement(762552..764324)
AA seq 590 aa
MSRNDEVAALLEEFADLLEATGVEYKPTAYRRAAENVREHAAPIEGLAAEGEDAVAEIDR
VGDAIASKVVEYVETGEIEELEELREELPVDMAGLTAVEGVGPKTVGSLYEALGVTTLDE
LEAAAEAGEIQEVSGFGAKTEENILDNIPFAREARERTRLGDARPVADAALSYLADRDAV
ELVEVCGSIRRWKDTIGDIDLLVASDAREPIVEALTDWPEADATIEAGTGKASVRASGTR
VDLRIVDPDEFGAALQYFTGSRAHNVAVRNRAIDRDLKLNEYGLFDISDVDDADAGGDDA
DADARRVGERVAGETEAGVYEALDMDPVPPELREDNGEVEAAAAGELPLLVDPDDLRGDL
HTHTDWSDGGFSIAEMARAAAERGYDYHVVTDHAAGPGIFGNTGLDEDEIESQAAAVAEA
AESVDIPVLHGIEANIDADGDFSTDDETLAALDLVVASPHSALGQDAEAATDRLVRAVKH
PHVDVLGHPTGRLINERPGLEPDVEAVVAAAVDADTAIEVNANPARLDADGEFVRAAVEA
GATIAVNTDAHAPRELDNARYGVHTARRGWAAAADVLNARSLNGLRSFLL
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgagccggaacgacgaggtcgccgccctcttagaggagttcgccgacctgctcgaggcg
acgggcgtggagtacaagccgaccgcgtaccgccgcgccgccgagaacgtccgcgagcac
gccgctccgatcgagggcctcgcggccgagggcgaggacgccgtcgccgagatcgaccgc
gtcggcgacgcgatcgcgtcgaaggtcgtcgagtacgtcgagaccggcgagatcgaggag
ttagaggagctgcgcgaggagctcccggtcgacatggcggggctcacggcggtcgagggc
gtcggcccgaagacggtcgggagcctctacgaggcgctcggggtcaccaccctcgacgag
ctggaggcggccgcggaggccggcgagattcaggaggtctccgggttcggcgcgaagacg
gaggagaacatcctcgacaacatcccgttcgcccgcgaggcccgcgagcgcacccggctc
ggcgacgcgcggcccgtcgccgacgcggcgctctcctacctcgccgaccgcgacgcggtc
gagttggtcgaggtgtgcggctcgatccggcgctggaaggacacgatcggcgatatcgac
ctcctcgtcgccagcgacgcgcgcgagccgatcgtcgaggcgctcaccgactggcccgag
gccgacgcgacgatcgaggcgggcaccgggaaggcgagcgtccgcgcgagcgggacccgg
gtcgacctccggatcgtcgacccggacgagttcggcgccgcgctccagtacttcaccggc
tcgcgcgcccacaacgtcgcggtgcgcaaccgcgcgatcgaccgcgacctgaagctcaac
gagtacggcctgttcgatatcagcgacgtcgacgacgcggatgccggaggcgacgacgcg
gacgccgacgcccggcgcgtgggcgagcgcgtcgccggggagaccgaggccggcgtctac
gaggcgctcgacatggatccggtcccgcccgagctccgcgaggacaacggcgaggtcgag
gcggccgcggcgggcgagctcccgcttctcgtcgacccggacgacctgcgcggcgacctc
catacccacaccgattggtccgacggcgggttctcgatcgccgagatggcgcgggccgcc
gccgaacgggggtacgactaccacgtcgtcaccgaccacgccgccggcccggggatattc
ggcaacaccgggctcgacgaggacgagatcgaatcgcaggccgcggcggtcgccgaagcg
gccgagagcgtcgacattcccgtgctccacgggatcgaggcgaacatcgacgccgacggt
gacttctcgaccgacgacgagacgctcgccgccctcgatctggtcgtcgcgtcgcctcac
tcggcgctcggccaggacgccgaggcggccacggaccggctggtccgcgccgtcaaacac
ccgcacgtcgacgttctcggtcacccgaccggacggctgatcaacgagcggccgggcctc
gaaccggacgtcgaggccgtcgtcgccgccgcggtcgacgccgacaccgcgatcgaggtg
aacgcgaaccccgcgcgcctcgacgccgacggggagttcgtccgcgccgcggtcgaggcg
ggcgcgacgatcgccgtcaacacggacgcgcacgcgcctcgcgaactcgacaacgccagg
tacggggtccacaccgcccgtcggggctgggccgcggccgccgacgtgctcaacgcccgg
tcgctcaacgggctccgctcgttccttttataa

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