Halorubrum sp. CBA1229: Hrr1229_004525
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Entry
Hrr1229_004525 CDS
T06658
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
halq
Halorubrum sp. CBA1229
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
halq03009
]
Hrr1229_004525
Ribosome biogenesis [BR:
halq03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
Hrr1229_004525
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
AAA_16
AAA_22
AAA_23
Fer4_6
AAA
AAA_29
AAA_14
Fer4
NB-ARC
AAA_24
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
QKY16179
UniProt:
A0A7D4Y4D1
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Position
complement(904573..906393)
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AA seq
606 aa
AA seq
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MADDSIAVVDLDRCQPDRCNYECANYCPPNRTGKECITERGEDAVEGDPDQIHISEEICL
GETCGICVEKCPFDAIEIINLPSELEEEPVHRYGENAFSLYGLPTPEPGNVTGILGPNGI
GKSTAVHGLAGEMVPNLGDHEGEADWDRVLDRFRGTGLQNYLKSLKEGDVSVARKPQYVD
QIPKQFDGNTRELLERTDERGALDELIERLNIAPVMDQDIDSISGGELQRVAIAACLARD
ADFYFLDEITPYLDIGQRMIVARLIRELADDDDTERSMLVVEHDLAILDLLADTLHVAYG
EPGAYGVITDPKSVRNGINEYLKGYLDNENMRIRPSAITFEEHAPRVASRSETLVEYPDL
SKSYGDGEFELHVEGGEINHSEVLGVVGPNGIGKSTLAKLFAGSLEPDKGSLDFALDIAY
KPQYVEIDQPMRVDAFLSSITDEFGSSYWNTEIAQPLQLDRIMEQNLTDLSGGERQRVAI
AACLSEDADLFLLDEPSAHLDVEQRVRATTAIRRYAENHDATVMVIDHDIYMIDLLADRL
MVFDGEPAERGHAAPPQDMRDGMNEFLSDLDITFRRDERTGRPRINKPDSQLDSKQKREG
EYYYSA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacagcatcgccgtggtcgacctcgatcggtgccagcccgaccggtgtaac
tacgagtgcgcgaactactgcccgccgaaccggacgggcaaggagtgcatcaccgagcgc
ggcgaggacgcggtcgagggcgacccggaccagatccacatctccgaggagatctgtctg
ggcgagacctgcggtatctgcgtcgagaagtgcccgttcgacgcgatcgagatcatcaat
ctcccctcggagctcgaggaggagccggtccaccgctacggcgagaacgccttctcgctg
tacgggctcccgaccccggagccgggcaacgtcaccggcatcctcggtcccaacgggatc
gggaagtcgacggcggtccacggcctcgccggcgagatggtcccgaacctcggcgaccac
gagggcgaggccgactgggaccgggtgctcgaccgcttccgcggcacggggctccagaac
tacctgaagtcgctgaaagagggcgacgtgagcgtggcgcgcaagccgcagtacgtcgac
cagatccccaagcagttcgacggcaacacccgcgagctgttggagcgcaccgacgagcgc
ggcgcgctcgacgagctgatcgagcggctcaacatcgccccggtgatggaccaagacatc
gactccatctccggcggcgagctccagcgcgtcgccatcgcggcgtgtctggcccgcgac
gccgacttctacttcctcgacgagatcacgccgtacctcgatatcggccagcggatgatc
gtcgcccggctcatccgcgagctggccgacgacgacgacaccgagcgctcgatgctcgtc
gtcgagcacgacctcgccatccttgacctcctcgccgacaccctccacgtcgcgtacggg
gagccgggcgcgtacggggtcatcaccgaccccaagtcggttcgcaacgggatcaacgag
tacctgaaggggtacctcgacaacgagaacatgcggatccggccctccgcgattaccttc
gaggagcacgccccccgcgtcgcctcgcgcagtgagacgctggtcgagtaccccgacctc
tcgaagtcgtacggcgatggcgagttcgagctccacgtcgagggcggcgagatcaaccac
tccgaggtgctcggcgtcgtcggcccgaacgggatcgggaagtcgacgctcgcgaagctg
ttcgcgggctcgctggagcccgacaaggggtcgctcgacttcgcgctcgacatcgcgtac
aagccgcagtacgtcgagatcgaccagccgatgcgcgtcgacgcgttcctctcctctatc
accgacgagttcggcagctcctactggaacacggagatcgcccagccgctccagctcgac
cggatcatggagcagaacctcacggacctctccggcggagagcgccagcgcgtcgcgatc
gcggcgtgcctctccgaggacgccgacctgttcctgctcgacgagccctccgcgcacctc
gacgtcgagcagcgggtccgggcgacgacggcgatccgccggtacgccgagaaccacgac
gcgaccgtcatggtgatcgaccacgacatctacatgatcgacctgctggccgaccgcctg
atggtgttcgacggcgagccggccgagcgcgggcacgccgcgccgccgcaggacatgcgc
gacgggatgaacgagttcctctccgacctcgacatcaccttccgccgcgacgagcgcacg
gggcgcccccggatcaacaagccggactcgcagctcgacagcaagcagaagcgcgagggc
gagtactactactcagcctga
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