Halorubrum sp. CBA1229: Hrr1229_004815
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Entry
Hrr1229_004815 CDS
T06658
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halq
Halorubrum sp. CBA1229
Pathway
halq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hrr1229_004815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halq03021
]
Hrr1229_004815
Transcription machinery [BR:
halq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hrr1229_004815
Prokaryotic type
Archaeal type
TFB
Hrr1229_004815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
QKY16233
UniProt:
A0A7D4Y074
LinkDB
All DBs
Position
complement(959960..960952)
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AA seq
330 aa
AA seq
DB search
MTRPTRQRDHDRQRVRDEDADETETDAEGVDADELDPEDFDPEELTRTADGELIHEETGM
IIEEEQIDPGPEWRAFNHSERQEKSRVGAPTTKTMHDKGLTTTIDWKDKDAYGRSISSKK
RSQMHRLRKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNEDL
IRGRSIEGVSTAALYAACRKEGIPRSLEEISDVSRVDRKEIGRTYRYISQELGLEMRPVD
PKKYVPRFSSELDLSEEVQSKANEIIETTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKT
QREVADVAQVTEVTIRNRYQEQIEAMGIHS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgacacggccaacccggcaacgggatcacgaccggcagcgtgtgcgggacgaggacgcc
gacgagaccgaaaccgacgccgagggggtcgacgcggacgagttggaccccgaagacttc
gatccggaggagctcacgaggacggccgacggggaactgatacacgaggagacggggatg
atcatcgaggaggagcagatcgatcccggcccggagtggcgcgcgttcaaccactcggag
cgccaggagaagtcgcgcgtcggcgccccgacgacgaagacgatgcacgacaaggggctg
acgacgacgatcgactggaaggacaaagacgcgtacggccgctctatctcctcgaagaag
cggtcacagatgcaccggctgcggaagtggcaggagcggattcggacgaaggacgcgggc
gagcgcaacctccagttcgcgctctcggagatcgaccgcatggcgagcgcgctcggggtg
ccgcgctccgtccgggaggtcgcctcggtcatctaccgacgggccttgaacgaggacctc
atccgcggccgctcgatcgagggcgtctccaccgccgcgctctacgccgcctgtcgcaag
gaggggatcccccggtcgctcgaggagatctccgacgtctcccgggtcgaccgcaaggag
atcggccggacgtaccgctacatctctcaggagctcggcttagagatgcgtccggtcgac
ccgaagaagtacgtcccccgcttctcctccgagctcgatctgagcgaggaggtccagtcg
aaggccaacgagataatcgagacgaccgccgagcaggggctcctctccgggaagtccccg
accgggtacgcggccgcagcgatctacgcggcctccctgctctgtaacgagaagaagacc
cagcgcgaggtcgccgacgtcgcgcaggtgaccgaggtcaccatccgcaaccggtaccaa
gagcagatcgaagcgatggggatccacagctag
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