Halorubrum sp. CBA1229: Hrr1229_005000 Help Entry Hrr1229_005000    CDS       T06658                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism halq  Halorubrum sp. CBA1229 Brite KEGG Orthology (KO) [BR:halq00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:halq03400]     Hrr1229_005000 Enzymes [BR:halq01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      Hrr1229_005000     5.6.2.6  RNA 3'-5' helicase      Hrr1229_005000 DNA repair and recombination proteins [BR:halq03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     Hrr1229_005000 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD_assoc DEAD Helicase_C WHD_Lhr ResIII AAA_25 DUF8106 HypA PqqD Motif Other DBs NCBI-ProteinID:  QKY16268 LinkDB All DBs Position 1003845..1006763 Genome browser AA seq 972 aa AA seqDB search MAEPSGMDAFAHLGSEVRSALSEQGFSTPTEPQREAIPPLAAGKNALVLAPTGTGKTETA MLPVFDAIVGARDAPGDQPREGISALYITPLRALNRDMMGRLEWWGDRLGVEVAVRHGDT TQYERSKQADDPPDVLITTPESLQAILTGSKMRVALEDVAHVVIDEVHELASAKRGAQLT VGLERLRRVAGPFQRVGLSATVGTPEEVGRFLVGSGTRDPTREGDREFEIVEVAAGTRTD VRVLDPEITDRDTTLAGELAVDETTASHVRTIREIVANHDSTLIFVNTRQTAEALGSRFK TLAEREEKDEGLTDPTEIEVHHGSLSKDVRIDVEDRFKAGELDGLVCTSSMELGIDVGRV DHVVQYGSPREVARLLQRVGRAGHRRDLISEGTVVTQGGDDTLEALAIARRADAELVEPA AIHHGSLDTVANQIVGVVMDEGEVHAREAYEVVTNAYPFRDLSEPEFQEIVRELDGNRLL WLDEESDTLEKSGGTWQYFYANLSMIPDESTYEVYDMSSRRGIGTLDERFVVNFAGPGET FIQRGEMWRITEVDEEEERVNVTPIADPAGEVPSWIGQEIPVPKPVAEEVGRIRGEAAEA LAAGSTPEAVAADLAERYPADERTIASALQPVVDHVDAGHPVPTDRRVVIEGSARTVAVN AAFGHEVNETLARLLAALVGQQAGSSVGMDVDPYRIEFEVPHGVDPGTFREVLETTDPDR LEAYLELALKKSDALKFTLAQVAAKFGAVKRYREGKGRFGGDRLLAALEGTPVYDEALRE VFHADLAVAETAALLEQIQDGSLGVEIARERTPLGTAGRSAGTEFLVPENADADVIETIR ERIRNDRVILFCLHCADWRRTTKVRRVRDQPECPDCGSTRVAALNPWDDETVAAVRAGEK DEEQERRTERAHRAASLVQTHGKRAVIALAARGVGPHNAARIINKLREDEDEFYRDVLRQ EREYARTQSFWD NT seq 2919 nt NT seq  +upstreamnt  +downstreamnt atggcggaaccgtcgggcatggacgcgttcgcgcacctcgggagcgaggtccggtcggcg ctctccgaacagggcttttccacgccgacggagccgcagcgcgaggcgatcccgccgctc gcggccgggaagaacgccctcgtcctcgcgccgacggggaccgggaagacagagactgcg atgctccccgtcttcgacgcgatcgtcggcgcccgcgatgcacccggggaccagccccgc gaggggatctccgcgctctacatcacgcccctccgcgcgctcaaccgcgacatgatgggc cggctggagtggtggggcgatcgactcggcgtcgaggtcgcggtacgccacggcgacacc acgcagtacgagcggtcgaagcaggccgacgacccgcccgacgtgctcatcacgacgccg gagagcctgcaggcgatcctgacgggctcgaagatgcgggtcgccttggaggacgtcgcg cacgtcgtgatcgacgaggtccacgagctcgcctccgcgaagcgcggcgcccagctgacg gtcgggctcgaacgcctccggcgcgtggcggggccgttccagcgggtcgggctctccgcg accgtggggacgccggaggaggtcgggcggttcctcgtcgggagcgggacgcgcgacccg acccgcgagggcgaccgcgagttcgagatcgtcgaggtcgccgcggggacgcgcaccgac gttcgcgtgctcgaccccgaaattacggaccgagatacgaccctcgccggagagctggcg gtcgacgagacgaccgcgagccacgtccggacgatccgggagatcgtcgcgaatcacgac tcgaccctgatcttcgtcaacacgcgccagaccgcggaggcgctcggctcgcggttcaag acgctcgcggagcgggaggagaaagacgagggactcaccgaccccaccgagatcgaggtc caccacgggtcgctctcgaaggacgtgcggatcgacgtcgaggaccggttcaaggcgggg gagctcgacgggctcgtctgcacctcctcgatggagctcggcatcgacgtggggcgggtc gaccacgtggtccagtacgggagcccgcgggaggtcgcccggctgctccagcgcgtcggg cgcgcggggcaccgccgcgacctcatctcggagggaacggtcgtgacgcagggcggcgac gacaccctcgaagcgctcgcgatcgcgcggcgcgccgacgccgaactcgtcgagccggcg gcgatccaccacggcagcctcgacaccgtcgcgaaccagatcgtcggcgtcgtgatggac gagggggaggtccacgcccgcgaggcgtacgaggtcgtcacgaacgcctacccgttccgg gacctctcggagccggagttccaggagatcgtccgggagctcgacggcaaccgcctgctg tggctcgacgaggagtcggacaccctcgagaagtcgggcggcacgtggcagtacttctac gcgaacctctcgatgatccccgacgagtccacctacgaggtgtacgacatgtcctctcgg cgcggtatcggcaccctcgacgagcggttcgtcgtcaacttcgccggcccgggcgagacg ttcatccagcgcggcgagatgtggcgcatcaccgaggtcgacgaggaggaggagcgcgtg aacgtcacgccgatcgccgaccccgcgggcgaggtgccctcgtggatcggccaggagatc ccggtcccgaagcccgtcgccgaggaggtcgggcgaattcggggcgaggccgccgaggcg ctcgcggcgggatcgacccccgaggccgtcgcggccgacctcgccgagcggtaccccgcc gacgagcggacgatcgcgagcgccctgcaaccggtcgtcgaccacgtcgacgccggccat ccggtcccgacggaccgccgggtcgtgatcgaggggagcgcccgcaccgtcgcggtcaac gcggccttcggccacgaggtcaacgagacgctcgcgcgcctcctcgcggcgctcgtcggc cagcaggcgggctcgtcggtcgggatggacgtcgacccgtaccggatcgagttcgaggtc ccccacggggtcgaccccgggaccttccgcgaggtgttggagacgaccgaccccgaccgg ctggaggcgtacctcgagctcgccctgaagaagtcggacgcgctcaagttcacgctcgcg caggtcgccgcgaagttcggcgccgtcaagcgctaccgcgaggggaaggggcggttcggc ggcgaccgcctgctcgcggccctggaggggacgcccgtctacgacgaggcgctccgcgag gtgttccacgccgacctcgcggtcgcggagaccgcggcgctcttggagcagatccaggac gggtcgttgggcgtggagatcgcccgcgagcgcacgccgctggggaccgccggccgctcc gcggggaccgagttcctcgtcccggagaacgccgacgccgacgtgatcgagacgatccgc gagcgcattcggaacgaccgggtgatcctcttctgtctccactgcgccgactggcggcgc acgacgaaggtgcggcgcgtccgcgaccagccggagtgccccgactgcggttcgacccgc gtcgccgcgctgaacccgtgggacgacgagaccgtcgcggcggtccgggcgggcgagaag gacgaggagcaggagcggcggacggagcgggcgcatcgggcggcgagcctcgtccagacg cacgggaagcgcgccgtgatcgcgctggcggcgcgcggggtggggccgcacaacgccgcg cggatcatcaacaagctgcgcgaggacgaagacgagttctaccgcgacgtgctccgacag gagcgtgagtacgcgcggacgcagtcgttctgggactag

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