Halorubrum sp. CBA1229: Hrr1229_005460
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Entry
Hrr1229_005460 CDS
T06658
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
halq
Halorubrum sp. CBA1229
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halq03400
]
Hrr1229_005460
Enzymes [BR:
halq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Hrr1229_005460
DNA repair and recombination proteins [BR:
halq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Hrr1229_005460
Prokaryotic type
Hrr1229_005460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKY16351
LinkDB
All DBs
Position
complement(1100260..1101645)
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AA seq
461 aa
AA seq
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MQLFWHRRDPRTRDNAGLAAAARAGAVVPVFVYDDDLFGTVGARQRAFFLRHVKRLEARY
RELGSDLVVRAGDPEDVLVGLADEHGAEIVFYNEYYRPARRNRQRAVEDALADAGVATDA
RTDAVLVDPGRLAERYANHSRFHDDWEAVPKSGPYPEPDPESLAAVRDGKTVSEPDADID
LPAAGYEAARDRFDDFLEHGIASYNDTRDNLRRAVAAPTHAVSRLSPYLATGAIGIRKVW
AGASDASEAVTGGDRRNVDKYLYELSWREQMYHLLYYNPDLGVSNYKSFPNEITWRDDDA
AFEAWTRGETGYPLVDAGMRQLNAEGYVHNRPRQVVASFLTKHLLIDWRRGARYFTKQLI
DHDYASNHGAWQWTASTGTDSVDVRIFDPVSQMSKYDDGAHFVKEYVPELRDVPAGKVVD
WPTLSHGERERLAPDYPHPIVDRNEGYERAQRVFEEALGKR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgttctggcaccgacgcgacccgcgcacccgtgacaacgccgggctcgcggcg
gccgcacgcgcgggggctgtcgtccccgttttcgtctacgacgacgacctgttcggcacg
gtgggggcgcgccagcgcgccttcttcctccgccacgtgaagcggttggaggcccgctac
cgggagctcggcagcgacctcgtcgtccgcgcgggcgaccccgaggacgtcctggtcggt
ctcgccgacgagcacggcgccgagatcgtcttttataatgagtactaccgcccggcccga
cgcaatcggcagcgggcggtcgaggacgcgctcgcggacgccggggtggcgacagacgcg
cggaccgacgccgtcttggtcgatcccggacgcttggcggagcgctacgccaaccacagc
cggttccacgacgactgggaagccgtccccaagtccggcccctacccggagcccgacccc
gagtcgctcgcggccgtacgcgacgggaagacggtctccgagccggacgccgacatcgac
ctcccggcggcggggtacgaggccgcccgcgatcggttcgacgacttcctcgagcacggg
atcgcgtcgtacaacgacacccgcgacaacctccggcgcgccgtggcggcgcccacccac
gcggtctcccggctgtctccgtacctcgcgaccggcgcgatcgggatccgcaaggtgtgg
gccggcgcgagcgacgcctccgaggccgtgaccggcggcgaccgacgcaacgtcgacaag
tacctgtacgagctgtcgtggcgcgagcagatgtaccacctgctctactacaaccccgac
ctgggagtgtcgaactacaagtcgttcccgaacgagatcacgtggcgcgacgacgacgcg
gcgttcgaggcgtggacgcgcggcgagaccggctacccgctcgtcgacgccgggatgcgc
cagctgaacgcggaggggtacgttcacaaccggccgcgacaggtcgtcgcgagcttcctc
accaaacacctcctgatcgactggcggcggggggcgcgctacttcaccaagcagctgatc
gaccacgactacgcctcgaaccacggcgcgtggcagtggaccgcgtccaccggcaccgac
tcggtcgacgtgcggatcttcgacccggtgagccagatgagcaagtacgacgacggggcg
cacttcgtgaaggagtacgtccccgaacttcgcgacgtgcccgccgggaaggtcgtcgac
tggccgacgctctcgcacggcgagcgggagcgactcgcgcccgactacccgcacccgatc
gtcgaccggaacgaggggtacgagcgcgcgcagcgcgtcttcgaggaggcgctcgggaag
cggtag
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