Halorubrum sp. CBA1229: Hrr1229_006370
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Entry
Hrr1229_006370 CDS
T06658
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
halq
Halorubrum sp. CBA1229
Pathway
halq03030
DNA replication
halq03420
Nucleotide excision repair
halq03430
Mismatch repair
halq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hrr1229_006370
03420 Nucleotide excision repair
Hrr1229_006370
03430 Mismatch repair
Hrr1229_006370
03440 Homologous recombination
Hrr1229_006370
03460 Fanconi anemia pathway
Hrr1229_006370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halq03000
]
Hrr1229_006370
03032 DNA replication proteins [BR:
halq03032
]
Hrr1229_006370
03400 DNA repair and recombination proteins [BR:
halq03400
]
Hrr1229_006370
Transcription factors [BR:
halq03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Hrr1229_006370
DNA replication proteins [BR:
halq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Hrr1229_006370
DNA repair and recombination proteins [BR:
halq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Hrr1229_006370
MMR (mismatch excision repair)
Hrr1229_006370
DSBR (double strand breaks repair)
HR (homologous recombination)
Hrr1229_006370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
OB_MEIOB_N
Ssb-like_OB
SSB
Motif
Other DBs
NCBI-ProteinID:
QKY16523
UniProt:
A0A7D5BUF9
LinkDB
All DBs
Position
1273423..1274901
Genome browser
AA seq
492 aa
AA seq
DB search
MGVIEDVYEDLDTDVEFEEFEAAVEDKVEQMGGLADEETAAMLIAHELRDEEADTIADIE
PGMNDVKFLGKVTSIGEIKTFERDEEDAEEGRVCNVDVADASGSVRVALWDEMAAAAEEQ
LEVGQVLRVMGRPKEGYSGLEVSADKVEPDEDAEVDVQVLDTYRVEDLSLGASDVDLVGQ
VLDTDSIRTFDRDDGSEGRVANLTVGDETGRVRVTLWDDKADLAEEFEAGEVVEVGDGYV
RERDGDLELHVGDRGTVERVDEDVEYVPETTDIADLEIDEVVDIGGGVIETDPKRTFDRD
DGSEGQVRNVRIKDETGEIRVALWGDKADREIDLADRVVFTDVEIQDGWQDDLEASANWR
STVTVLDEETEAAGNAGTDVSGSGDGSGNGDRAASDTGLGAFAEDGQKAATEAVSGGTGG
EESAGSGGAATATATAEEIEFTGTVVQTGDPVVLDDGQQTKSVETDASLRLGEEVTVRGT
ERDGTIHADDVF
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgatagaggacgtctacgaggatctcgacaccgacgtcgagttcgaggagttc
gaggcggccgtcgaggacaaggtcgagcagatgggcgggctcgccgacgaggagacggcc
gcgatgctgatcgcccacgagctgcgcgacgaggaggccgacaccatcgccgacatcgag
ccggggatgaacgacgtgaagttcttggggaaggtgacctccatcggcgagatcaagacg
ttcgagcgcgacgaggaggacgccgaggagggccgcgtctgcaacgtcgacgtcgcggac
gcctccggctccgtccgcgtcgcgctgtgggacgagatggccgcggcggccgaggagcag
ctggaggtcggccaggtgctccgcgttatgggccgcccgaaggaggggtacagcgggctt
gaagtgagcgccgacaaggtcgagcccgacgaggacgccgaggtcgacgtgcaggtgctc
gacacctaccgcgtcgaggacctctcgctcggcgcctccgacgtcgacctcgtcgggcag
gtgctcgacaccgactcgatccgcacgttcgaccgcgacgacggcagcgaggggcgcgtg
gccaacctcaccgtcggcgacgagacgggtcgggtgcgcgtcacgctgtgggacgacaag
gccgacctcgccgaggagttcgaggccggcgaggtcgtcgaggtgggggacggctacgtc
cgcgagcgcgacggcgacctggagcttcacgtcggcgaccgcggcacggtcgagcgcgtc
gacgaggacgtcgagtacgtgcccgaaacgacggacatcgccgacctggagatcgacgag
gtcgtcgacatcgggggcggcgtcatcgagacggatccgaagcgcacgttcgaccgcgac
gacggcagcgaggggcaggtgcggaacgtccggatcaaagacgagacgggcgagatccgg
gtcgcgctgtggggcgacaaggccgaccgcgagatcgacttggcggaccgcgtcgtcttc
actgacgtggagatccaagacggctggcaggacgacctggaggcgtccgcgaactggcgc
tcgacggtcaccgtgctcgacgaggagacggaggcggcgggcaacgcggggaccgacgtg
tccgggtccggcgacggttccggaaacggcgaccgcgccgcgagcgacaccggactcggc
gccttcgccgaggacggacagaaggcggcgaccgaggccgtctccggcgggaccggcgga
gaggagagcgccggatccggcggcgcggcgaccgcgacggcgaccgcggaggagatcgag
ttcacgggcaccgtcgtgcagaccggcgaccccgtcgtgttggacgacggccagcagacg
aaaagcgtcgagaccgacgcgagcctccgactgggcgaggaagtcaccgtccggggcacc
gagcgcgacgggacgatccacgcggacgacgtgttctag
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