Halorubrum sp. CBA1229: Hrr1229_008100
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Entry
Hrr1229_008100 CDS
T06658
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
halq
Halorubrum sp. CBA1229
Pathway
halq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hrr1229_008100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halq03021
]
Hrr1229_008100
Transcription machinery [BR:
halq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hrr1229_008100
Prokaryotic type
Archaeal type
TFB
Hrr1229_008100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
DZR
TackOD1
Motif
Other DBs
NCBI-ProteinID:
QKY16840
LinkDB
All DBs
Position
complement(1622620..1623699)
Genome browser
AA seq
359 aa
AA seq
DB search
MSRTNASEKTVSDAQLPSPAERGHTPTVEHAPSTRAVCPECESQVITNDETSFCTACGLV
VADEWVDRSPTLNDLGLVGDADQSIETVDPLRTDKGLHTKIGRNTDGHGNPLSNEQWETV
QRLRKWHKRMQFGAKRKRTKRLNEGLRDVEMIGGNLGLPDHVTKQAARYLRRGSEARLPG
GRMAWESLAGGAVLLAVRDAALDREAIDEAVATYAKAPRERVCAAARKLRCECALDVPVT
RPDAVVTVLEGLEGGALPGARAVRTWQLAQHLLALADRVPVGPGTPRATVAGAALYAADR
LLDGSQLTQPQVVAAVEPIVPTSRHRIGRYSRELVDAYKAAHGTDDPAVGLEAGRDSRR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtacgaacgcgagcgaaaagacggtttcggacgcacagctcccatcaccagct
gaacgcgggcacactcccacggtcgaacacgcgccctcgacgcgggcggtgtgtcccgag
tgtgagagtcaggtgatcaccaacgacgagacatcgttctgtacggcctgcgggctggtt
gtcgccgacgagtgggtcgatcggagcccgacgctgaacgacctgggcctagtcggagac
gccgaccagagcatcgagacggtggacccgctgcggacggacaagggcctccacacgaag
atcggacggaacactgatggacacggcaatcccctgagcaacgagcagtgggagacggtc
cagcggttgcggaagtggcacaagcgcatgcagttcggcgcaaagcgcaagcgaacgaag
cggctcaacgaagggctgcgtgacgtcgagatgatcggcggcaacctggggctcccggac
cacgtgaccaaacaggcggcccggtacctccgacggggctcggaggcgcggctgccgggc
gggcggatggcctgggagtcgctcgccggtggcgccgtcctcttggccgtgcgcgacgcg
gccctcgaccgtgaggcgatcgatgaggcggtcgccacctacgccaaagcaccccgcgaa
cgggtgtgtgcggcggcccggaagctccggtgtgaatgcgcgctcgacgtgcccgtcact
cggcccgacgccgtggtgacggtgctcgaggggcttgagggcggtgcgcttcccggtgcc
cgtgcggttcggacgtggcagctggcccagcacctgctggcactcgccgaccgggtgccg
gttgggccggggacgccccgggcgacggtcgcaggcgcggcgctgtacgcggccgaccgg
ctcctcgacggctcgcagctcacccagccgcaggtggttgcggcggtcgagccgattgtg
ccgacctcgcggcaccggatcgggcggtacagtcgggagctcgtcgacgcctacaaggcc
gcacacggcaccgatgacccggctgtcggactcgaggcgggtcgcgacagccggcggtga
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integrated database retrieval system
