Halorubrum sp. CBA1229: Hrr1229_009895
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Entry
Hrr1229_009895 CDS
T06658
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
halq
Halorubrum sp. CBA1229
Pathway
halq00260
Glycine, serine and threonine metabolism
halq00460
Cyanoamino acid metabolism
halq00630
Glyoxylate and dicarboxylate metabolism
halq00670
One carbon pool by folate
halq00680
Methane metabolism
halq01100
Metabolic pathways
halq01110
Biosynthesis of secondary metabolites
halq01120
Microbial metabolism in diverse environments
halq01200
Carbon metabolism
halq01230
Biosynthesis of amino acids
halq01240
Biosynthesis of cofactors
halq04981
Folate transport and metabolism
Module
halq_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Hrr1229_009895
09102 Energy metabolism
00680 Methane metabolism
Hrr1229_009895
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Hrr1229_009895
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Hrr1229_009895
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Hrr1229_009895
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Hrr1229_009895
Enzymes [BR:
halq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Hrr1229_009895
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QKY17185
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Position
complement(1990037..1991284)
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AA seq
415 aa
AA seq
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MDNEHVREVDPAVADALAGERDRQEQTLAMIASENHVSEAVLEAQGSVLTNKYAEGYPGA
RYYAGCEYADEVEELAIERAKELWGAEHVNVQPHSGTQANQAVYYAVLEPGDKILSLDLT
HGGHLSHGHPANFTGQIYEVEQYEVDPETGYIDYEGLRETAEEFEPDIIVSGYSAYPRTV
DWEAIQAAADAVDAYHLADIAHITGLVAAGVHPSPVGVADFVTGSTHKTIRAGRGGIVLC
DEEYADDIDKAVFPGGQGGPLMHNVAGKAVGFKEALEPEFEAYAQQVVDNAEVLAETLQG
HGLSLVSGGTDNHLVLADLRDSHPDLPGGDAEDALAAANIVLNGNTVPGETRSPFNPSGI
RAGTAGLTTRGFDEAAIEEVGDLIYRVVDDVDSDEVIYEVGERVVELCEAHPLYE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgagcacgtccgggaggtcgacccggcggtcgccgacgcgctggccggcgag
cgcgacagacaggagcagacgctcgcgatgatcgccagcgagaaccacgttagcgaggcg
gtgctggaggcgcaggggagcgtcctcacgaacaagtacgcggaggggtacccgggcgcg
cggtactacgcgggctgcgagtacgccgacgaggtcgaggagctcgcgatcgagcgcgcc
aaggagctgtggggcgccgaacacgtcaacgtccagccgcactccgggacgcaggcgaac
caggcggtgtactacgcggtgttggagcccggcgacaagatcctctcgctggacctgacc
cacggcggccacctctcgcacggccaccccgcgaacttcaccgggcagatctacgaggtc
gagcagtacgaggtcgaccccgagacggggtacatcgactacgagggcctccgcgagacg
gccgaggagttcgagccggacatcatcgtctccggctactccgcgtacccgcggaccgtc
gactgggaggcgatccaggccgccgccgacgcggtcgacgcctaccacctcgccgacatc
gcccacatcaccgggctcgtcgcggcgggcgtccacccgtcgccggtcggcgtcgccgac
ttcgtcaccggctcgacccacaagacgatccgcgccgggcgcggcgggatcgtactgtgc
gacgaggagtacgccgacgacatcgacaaggcggtgttccccggcgggcagggcggcccc
ctcatgcacaacgtcgccggcaaggcggtggggttcaaggaggcgctcgagcccgagttc
gaggcgtacgcgcagcaggtcgtcgacaacgccgaggtcctcgccgagacgcttcagggg
cacgggctctccctggtctccggcggcaccgacaaccacctcgtgttggccgacctccgc
gactcgcacccggacctgccgggcggcgacgcggaggacgcgctcgcggccgcgaacatc
gtgctcaacgggaacaccgtgccgggcgagacgcggtcgccgttcaatccctcggggatc
cgcgcagggacggccgggctcacgacccgcgggttcgacgaggcggcgatcgaggaggtc
ggcgatctcatctaccgcgtcgtcgacgacgtcgacagcgacgaggtcatctacgaggtc
ggcgagcgcgtcgtcgagctctgcgaggcgcacccgctgtacgagtag
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