Halorubrum sp. CBA1229: Hrr1229_010140
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Entry
Hrr1229_010140 CDS
T06658
Name
(GenBank) mechanosensitive ion channel family protein
KO
K03442
small conductance mechanosensitive channel
Organism
halq
Halorubrum sp. CBA1229
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
halq02000
]
Hrr1229_010140
Transporters [BR:
halq02000
]
Other transporters
Pores ion channels [TC:
1
]
Hrr1229_010140
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
AbiJ_NTD5
Motif
Other DBs
NCBI-ProteinID:
QKY18408
LinkDB
All DBs
Position
complement(2030855..2031973)
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AA seq
372 aa
AA seq
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MLGVRLLTAWAKRRDGDLTSSTRLLLSASVGAATAVGALSLLVVWDRSGALLDAFEAAAI
TDQLANVVIAVVLLASAYAVTDFLGGVIRQLSADSTVLTDHQEEVVRRLTQLTVYTFALL
VVVGLFTDNVGGLLVGAGFLGIVVGMAARQTLGAILAGFVLMFSRPFEVGDWVEVGDHEG
TVTEISIMSTRLRSFDGEVVTLPNDDVRSGSIIDRSRRNRLRIEVEVGVDYAADIERAAA
VIEEAIGGVEDVASMPEPDVVTKRFDDSAVVLGARYWIRNPSMRKRWRTQTAAMGEIKSA
LEAAGIIIPFPQQTLSAREEGTSGPQLDASVEGRAATRGGGNRSDGGEQTDESGDEGDDA
GTGDDGDAGGDE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgctcggcgtccggctgctcaccgcgtgggcgaagcggcgggacggcgatctcacctcg
tccacgcggctgctgctctcggcgtccgtcggcgccgcgaccgcggtcggcgcgctctcg
ctgctcgtggtgtgggaccggagcggggcgctgctcgacgcgttcgaggcggccgcgatc
acggaccagctggcgaacgtcgtgatcgcggtggtactgttggcgagcgcctacgccgtc
accgacttcctcggcggcgtcatccgccagctctccgccgatagcaccgtcctcaccgac
caccaggaggaggtggtccggcggctcacgcagctgacggtgtacaccttcgcgctgctc
gtggtcgtcgggctgttcaccgacaacgtcggcggcctcctcgtcggcgcgggcttcttg
gggatcgtggtcgggatggcggcccgccagacgctcggcgcgatcctcgccgggttcgtg
ctcatgttctcccggccgttcgaggtcggcgactgggtcgaggtcggcgaccacgaggga
actgtcacggagatctcgatcatgagcacccgcctccggtcgttcgacggcgaggtcgtc
acgctcccgaacgacgacgtgcggtcggggtcgatcatcgaccgctcgcgccggaaccgc
cttcggatcgaggtcgaggtcggcgtcgactacgcggccgacatcgagcgcgcggcggcg
gtgatcgaggaggcgatcggcggcgtcgaggacgtggcctcgatgcccgagccggacgtc
gtgacgaagcggttcgacgactcggcggtcgtgctcggcgcccggtactggatccgaaac
ccgagcatgcggaagcgctggcgcacgcagacggccgcgatgggcgagatcaagtccgcg
ctggaagcggcggggatcatcatcccgttcccgcagcagacgctctccgcgcgcgaggag
ggcacgtccggcccgcagctcgacgcgtcggtcgaggggcgggcggcgacgcgcggcggc
gggaaccggagcgacggcggcgaacagaccgacgaaagcggcgacgagggcgacgacgcg
ggcaccggggacgacggcgacgcggggggagacgagtga
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