Halorubrum sp. CBA1229: Hrr1229_010665
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Entry
Hrr1229_010665 CDS
T06658
Name
(GenBank) GAF domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
halq
Halorubrum sp. CBA1229
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halq03000
]
Hrr1229_010665
Transcription factors [BR:
halq03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hrr1229_010665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF_2
HTH_10
Response_reg
PAS_4
GAF_3
GAF
PAS_9
PAS
PAS_8
Sigma70_r4
Glyco_tranf_2_4
Motif
Other DBs
NCBI-ProteinID:
QKY17325
UniProt:
A0A7D5CCI4
LinkDB
All DBs
Position
complement(2140630..2143509)
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AA seq
959 aa
AA seq
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MNAETRSVLDTSAVVVVGDTPWITSYAAALREEFDATVHEVSTGSAAQEKLRETTVDCVV
TDDGLAGTTGVDLVRRIRDTSASLPVILGTADGSERLASEAIEAGVTDYIAVTDPSDDTV
TDALRRTERALRRAQRSATQRERARQFDAIFHDTRSATWVLDPDGTLTRVNQAARDMVDT
DADAVVGDPFWTLPWWPDDGQTRDDVRRLVDAAGDGEFGHAVVIQDAATGSSVLELSVQP
VTDGRGELVSIIVDSVEITDRVDLERELRRSEELHRVTLNNMTDTVLMTDEGGEYTYVCP
NAHFIFGYTADEIRELGTIEDLLGEDLFDRERLADEGVLKNIETTATDKAGREHTLLVNV
REVAIQDGTLLYSCRDITKRKQRERSLAALQETARDFLYAETHQEIAQHVVDDTADVLGL
DASAVYLFDADDNHLQPVVHSQAMRNAHGPLPAVHADGNDLVSHSFVENDAGFFADVHDA
DRLANVATDLRSAAYVPLGNHGVFVVGSTEVGAFDEVTRELTDLLAATAEAALDRVDRES
QLREQDRELQRQNDQLTALNQINETIREIDQALVQSETREEIDHTVCDRLTADGRFQFAW
IGTLDGPSETVTPQAWAGTDQGYLDTQSFPVAAENVEPAGRTAATGAMTLVSNVAADLRA
ASWRKDAISRDLLSALSVPLVYNDLSYGVLTVYATTPDAFGETIRSVFAELGETIAAAIS
ASERKRALLTTSMTRVEYAVTDPSFVLTQLAAAADCTLTYEGGVQQTASGNYVFVTVDDA
PLDAVVDAANGLRVVEGVQRIRGGDSGGVVRLRLSEPFLATELADHGAVLRGATATQTDT
ELVIDISQGVEVRHVTRFVSERFRDVALTSKQTREQASEHGLYASVLDQLTDRQLEVLET
AYYSGFFESPREATGEAVSDSLDISPQAFYQHIRTAQRKLFTSLIDDHSPVVTQSADGT
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgagacacgtagcgtcctcgacacgtccgccgtcgtcgtcgtcggcgacacg
ccgtggataacgtcgtacgccgccgcgctccgagaggagttcgacgcgacggtccacgag
gtgtcgacggggtcggcggcacaagagaagctccgcgagacgaccgtcgactgcgtggtc
acggacgacggcctcgccggaacgacgggggtcgacctcgtgcgccgcatccgcgatacg
tccgcgtcgctcccggtgattctggggacggccgacggcagcgaacgcctcgccagcgag
gcgatcgaggccggcgtcaccgattacatcgccgtcacggatccgtcggacgacaccgtc
accgacgcgctgcggcgaaccgagcgggcgctccggcgggcccagcgctcggccacgcag
cgagagcgtgcgcgacagttcgacgccatcttccacgataccaggtccgcgacgtgggtg
ctcgaccccgacgggacgctgacacgcgtcaaccaggccgcccgcgacatggtggacacg
gacgccgacgccgtcgtcggcgacccgttctggacgcttccctggtggcccgacgacggc
cagacgagggacgacgtccgccggctcgtggacgcggccggagacggcgagttcgggcac
gccgtcgtcatccaggacgccgcgacgggctccagcgttctggagctctccgtccagccg
gtcaccgacgggcgcggcgagctcgtctcgatcatcgtcgacagcgtcgaaatcaccgac
cgcgtcgacctcgaacgggagctccggcgctccgaggagctccaccgcgtcacgctcaac
aacatgaccgataccgtcctcatgaccgacgagggcggtgagtacacgtacgtctgcccg
aacgcgcacttcatcttcgggtacaccgccgacgagatccgggagctcggaacgatcgag
gacctgctcggcgaggacctcttcgaccgcgagcggctcgctgatgagggagtcttgaag
aacatcgagacgacggcgacggacaaggccggccgcgaacacacgctgttggtgaacgtc
cgcgaggtcgctattcaggacgggacgctgctgtacagctgtcgggacatcacgaaacgg
aagcagcgcgaacggtccctggccgctctccaagagaccgcacgggacttcctctacgcc
gagacgcaccaggagatcgcccagcacgtcgtcgacgacaccgcggacgtccttggcctc
gacgcgagcgccgtctacctcttcgacgccgacgacaaccatctccagcccgtcgtccac
tcgcaggcgatgcggaacgcccacggtccgctgccagccgttcacgccgacgggaacgac
ctcgtgagccacagcttcgtcgagaacgacgccggcttcttcgcggacgtccacgacgcg
gaccgcctcgcgaacgtcgcgaccgacctccggagcgcggcgtacgtcccgctcggcaac
cacggcgtgttcgtggtcggctcgacggaggtcggcgcattcgacgaggtcacgcgagag
ctcaccgacctcctcgccgcgaccgcggaggcggcgctcgaccgcgtcgaccgcgagtcg
cagctccgcgaacaggaccgcgagctccagcgacagaacgaccagctcaccgcgctcaac
cagatcaacgagactatccgcgagatcgatcaggcgctcgtgcagtccgagacccgagag
gagatcgaccacaccgtctgcgaccgcctcaccgccgacggccgcttccagttcgcctgg
atcggcacgctcgacgggccgagcgagacggtgacgccgcaggcgtgggccggaaccgat
caggggtatctcgacacgcaatcgttccccgtggccgctgagaacgtcgagcccgcgggc
cggaccgcggcgaccggagcgatgacgctcgtctcgaacgtcgcggccgacctccgcgcg
gcctcgtggcgcaaggacgcgatctcgcgcgacctgctctccgcgctgagcgtcccgctg
gtgtacaacgacctctcgtacggcgtcctgacggtgtacgcgaccacgccggacgccttc
ggtgagaccatccggtccgtgttcgcggagctgggagagacgatcgccgccgccatcagc
gcgagcgagcgcaagcgggcgctgctcaccacgtcgatgacccgggtcgagtacgcggtc
accgatccgtcgttcgtgctgacgcagttggcggcggccgcagactgcacgctcacctac
gaaggcggcgtccaacagaccgccagcggcaactacgtcttcgtcaccgtcgacgacgcg
ccgctcgacgccgtcgtcgacgcggcgaacggcctccgggtcgttgagggcgtacagcgc
attcgcggcggtgactccggcggcgtggtgcgactccggttgtccgagccgttcctcgcg
acggagctcgccgatcacggcgccgtccttcggggtgcgaccgctacgcagacggacacg
gagctggttattgacatctcccagggcgtcgaggtcaggcacgtcactcggttcgtcagc
gagcggtttcgcgacgtcgcgctcacgtcgaagcagacgcgggaacaggcgtccgaacac
gggctctacgcgtcggtgctcgaccaactgaccgacagacaactagaggtgctggagacg
gcgtactacagcgggttcttcgagtccccgcgggaggcgaccggggaggccgtgtcggac
tcgctggacatctctccccaggccttctatcaacatatccgaaccgcacagcggaagctg
ttcacgtcgctgatcgacgaccactcgcccgtcgttacgcagtccgccgacggcacctga
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