Halorubrum sp. CBA1229: Hrr1229_011115
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Entry
Hrr1229_011115 CDS
T06658
Name
(GenBank) tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
halq
Halorubrum sp. CBA1229
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halq03016
]
Hrr1229_011115
Enzymes [BR:
halq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Hrr1229_011115
Transfer RNA biogenesis [BR:
halq03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Hrr1229_011115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
SPL
Motif
Other DBs
NCBI-ProteinID:
QKY17407
UniProt:
A0A7D5CHL5
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All DBs
Position
2237915..2239225
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AA seq
436 aa
AA seq
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MATYHIETYGCSSNRGESREIERALRDGGHRPADGPEDADVAILNTCTVVEKTERNMLRR
AEELQETTADLVVTGCMALAQGELFEEAGVDAEILHWDEVPTYALNGECPTTTPDAEPVL
DGVVGLLPIARGCMSNCSYCITKFATGRVDSPPVEENVEKARALVHAGAKEIRVTGQDTG
VYGWDTGDRKLPELLDRICDIDGEFRVRLGMANPGGIHGIHEELADVFAENEELYDFIHA
PVQSGSDDVLEEMRRQHRVDKFREVVETFDDRLDHWTLSTDFIVGFPTESDADHELSMDL
LAEVRPEKINVTRFSKRPGTDAADMKGLGGTVKKERSKAMSELKMEVVGEAYESMVGERY
EVLVVEEGTGDSVKCRDSAYRQIIVQNASDRGVEVGDFLEVEVTGHNTVYAFGEPVDDAR
SDAAGVDDAGPVPGDD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtaccacatcgaaacctacggctgtagttcgaaccggggtgagagccgggag
atagagcgcgcgcttcgcgacggcggccaccgcccggccgacggacccgaggacgccgac
gtcgccatcctcaacacctgcacggtcgtcgagaagacggagcggaacatgctccgccgc
gccgaggagctccaggagacgaccgccgacctcgtcgtcacgggctgcatggcgctcgcg
cagggcgagctgttcgaggaggccggtgtcgacgccgagattctccactgggacgaggtt
cccacgtacgcgctcaacggggagtgcccgacgaccacgcccgacgccgagccggtcctc
gacggcgtcgtgggcctcctccccatcgcccgcggctgcatgagcaactgctcgtactgc
atcacgaagttcgcgaccggccgggtcgactccccgccggtcgaggagaacgtcgagaag
gcccgtgcgctggtccacgccggcgccaaggagatccgggtgaccgggcaggacaccggc
gtctacggctgggataccggcgaccggaagctcccggagctgctcgaccgcatctgcgac
atcgacggcgagttccgggtccggctcgggatggcgaaccccggcggcatccacgggatc
cacgaggagctcgccgacgtgttcgcggagaacgaggagctgtacgacttcatccacgcg
ccggtccagtcgggctccgacgacgtgctggaggagatgcggcggcagcaccgcgtcgac
aagttccgcgaggtggtcgagacgttcgacgaccggctcgaccactggacgctctcgacc
gacttcatcgtcggcttcccgaccgagagcgacgccgaccacgagctgtcgatggacctc
ctcgccgaggtccgcccggagaagatcaacgtcacccgcttctcgaagcgccccggcacg
gacgccgccgacatgaaggggctcggcgggacggtcaagaaggagcgctcgaaggcgatg
tcggagctgaagatggaggtcgtcggcgaggcgtacgagtcgatggtcggcgagcgctac
gaggtgctcgtcgtcgaggagggcaccggcgactccgtgaagtgccgggactccgcctac
cgccagatcatcgtccagaacgcgagcgatcgcggcgtcgaggtgggcgacttcctggag
gtcgaggtgaccggtcacaacacggtgtacgcgttcggcgaacccgtcgacgacgcgcgt
tccgacgccgccggcgtcgacgacgccggtcccgtgccgggcgacgactga
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