Halorubrum sp. CBA1229: Hrr1229_012000
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Entry
Hrr1229_012000 CDS
T06658
Name
(GenBank) TIGR04347 family pseudo-SAM/SPASM protein
KO
K22226
Fe-coproporphyrin III synthase
Organism
halq
Halorubrum sp. CBA1229
Pathway
halq00860
Porphyrin metabolism
halq01100
Metabolic pathways
halq01110
Biosynthesis of secondary metabolites
halq01240
Biosynthesis of cofactors
Module
halq_M00847
Heme biosynthesis, archaea, siroheme => heme
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Hrr1229_012000
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GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
SPASM
Motif
Other DBs
NCBI-ProteinID:
QKY17573
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Position
2413319..2414542
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AA seq
407 aa
AA seq
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MISVSKLLCGLDAESDGLRYDAAADSKKPQITDDKQQRPVVVWNTTKRCNLYCEHCYAAA
DKEGAPNELSTAEGKSLIDDLAEFGVPVLLFSGGEPLVREDLAELVSYADDAGIRPVLST
NGTLLTRENARELKEAGLKYAGVSVDGLPERNDRIRGEEGAFDAAVRGIEACLDVGLKTG
LRYTITEHNVDDLAGVVDLLVDVGVDRFCFYHLDYGGRGAEIADVDLTPEATRQAVADLC
DLTREYHAAGEEIETLLVGNYADAGHLVEYADREIGTDRARLIYEHLRRNGGDPTGERVA
DVDPVGNVHLTQFWQGYSPGNVRDRSFGAIWTDESNPLLDGLRNREERLTGRCADCAYKE
ICRGGSRLRALSAHGDPFAPDPKCYLTETERDGAAALSRLSGESPAD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatctcggtcagcaagctcctctgcgggctcgacgccgagagcgacgggctgcggtac
gacgccgccgccgactcgaagaagccgcagatcacggacgacaagcagcaacgcccggtc
gtcgtctggaacacgacgaagcggtgtaacctctactgcgagcactgctacgccgcggcc
gacaaggagggggcgccgaacgagctgtcgacggcggaggggaagtcgctcatcgacgac
ctcgccgagttcggcgtgccggtcctcctcttttccggcggggagccgctcgtccgcgag
gatctcgccgagctcgtctcgtacgccgacgacgccgggatccggccggtcctctcgacg
aacgggaccctgctcacccgggagaacgcgcgggagctgaaggaggcgggactcaagtac
gccggcgtctcggtggacgggctccccgagcgcaacgaccggatccggggagaggagggc
gcgttcgacgccgccgtccgcgggatcgaggcgtgcctcgacgtcgggctcaagacgggg
ctccgctacacgatcaccgagcacaacgtcgacgacctcgcgggcgtcgtcgacctcctc
gtcgacgtcggcgtcgaccgcttctgcttctaccacctcgactacggcgggcgcggggcc
gagatcgccgacgtggacctgacccccgaggcgacccggcaagcggtcgccgacctctgt
gacctcacccgcgagtaccacgcggcgggcgaggagatcgagacgctgctcgtcggcaac
tacgccgacgccggccacctcgtggagtacgccgaccgagagatcgggacggaccgcgcc
cggctgatctacgagcacctccggcgcaacggcggcgaccccaccggcgagcgcgtcgcc
gacgtcgaccccgtcggcaacgtccacctcacgcagttctggcaggggtactcccccggc
aacgtccgggaccgctcgttcggcgccatctggaccgacgagtcgaacccgctcctcgac
gggctccggaaccgcgaggagcggctcaccgggcggtgcgcggactgcgcgtacaaggag
atctgccgcggcggctcgcggctccgcgccctctcggcgcacggcgacccgttcgcgccc
gacccgaagtgctacctcaccgagacggagcgcgacggcgcggccgcgctgagccggctc
tccggcgaatcgccggcggactga
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