Halorubrum sp. CBA1229: Hrr1229_013660
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Entry
Hrr1229_013660 CDS
T06658
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
halq
Halorubrum sp. CBA1229
Pathway
halq02020
Two-component system
halq02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hrr1229_013660
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Hrr1229_013660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
halq02035
]
Hrr1229_013660
Bacterial motility proteins [BR:
halq02035
]
Flagellar system
Chemotaxis proteins
MCPs
Hrr1229_013660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MCPsignal
DUF8567
Helical_needle
HAMP
ATG17_like
DUF948
DUF1664
SKA1
IFT57
NPV_P10
CCDC39
HOOK
FKBP15
CALCOCO1
PI3K_P85_iSH2
LEKR1
AAA_13
Motif
Other DBs
NCBI-ProteinID:
QKY18442
LinkDB
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Position
2709652..2711325
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AA seq
557 aa
AA seq
DB search
MDRLGVSESIERKIVTAVGIQFLVTVGIFLTPILFSGTLASAVSGALFLGAIAAIYNTLL
IVRRDFVAPLKRLEAGADAIAAGDVRAAESRGPAGAVGADQPDEIGSLVNSFAEVERYLG
TVSAQAEALAAREFDDPVLDEEVPGGFGDALDEMAANMTAYTAELESVVDAFDDAAQRAQ
DGDLTATIDAESLATDDDRYDDLVENYNRLVATLGGTIGEVRSFTDDVAAASDDVRASMD
EVDDASEEVARSVQEISDGASEQTSDLEAVSAEMSTLSATVEEIAASADDAATTARSAAD
RGRDGREEAAEAIAELEALESRIGETATAVEDLVDRIGEIDEIAAVIDGIAEETNLLALN
ASIEAARADGSGQGFAVVADEVKALAEETREEAAAISDRIDEVQTASADTADDVDAMESQ
VSESVGAVESTLREFEEVVEDVTVVDETVQEISEATDDQARTTQEVVDMVEDVASVSGQT
ATEAETVAAAAEEQTASVSEVTDRAHALSDRSDELLARLDRFEVPAERATGASSSTGAGA
QSESGSGAQTRPTPTDD
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtctcggcgtctccgaatcgatagagcggaagatcgtgacggccgtcgggatc
cagtttctcgtcaccgtcgggatctttctcacgccgatcctcttctccgggacgctcgcg
tccgccgtctccggagcgctgttcctcggagcgatcgctgcgatctacaacaccctcctc
atcgtgcggcgggacttcgtcgcgccactcaagcggttggaggccggggcggacgcgatc
gcggccggcgacgtccgagcggcggagagccgcggccccgcgggggcggtcggcgcagac
cagccggacgagatcgggagtctcgtgaactcgttcgccgaggtcgagcgctacctcggc
accgtctcggcgcaggccgaggcgctcgcggcgcgggagttcgacgatccggtcctcgac
gaggaggtgccgggcggcttcggcgacgccctcgacgagatggccgcgaacatgacggcg
tacacggccgagctggagtcggtggtcgacgcgttcgacgacgcggctcagcgcgcgcag
gacggcgacctcaccgcgacgatcgacgcggaatcgctcgccaccgacgacgacagatac
gacgacctcgtcgagaactacaaccggctcgtcgccacgctcggcgggacgatcggcgag
gtccgttcgttcaccgacgacgtcgcggcggcgagcgacgacgtgcgggcgagcatggac
gaggtcgacgacgcgagcgaggaggtggcgcggtcggtacaggagatctcggacggcgcg
agcgaacagacgagcgacctggaggcggtctcggccgagatgagcacgctctcggcgacc
gtcgaagagatcgcggcctccgccgacgacgcggcgacgaccgcccggagcgccgcggac
cgggggcgggacggacgagaggaggccgccgaggcgatcgcggagcttgaagcgctcgaa
tcccggatcggggagacggcgaccgcggtcgaggacctcgtcgaccggatcggcgagatc
gacgagatcgctgccgtgatcgacggaatcgcggaggagacgaacctgctcgcgctgaac
gcctcgatcgaggccgcccgggccgacggttccggccaggggttcgcggtggtcgcggac
gaggtgaaggcgctcgccgaggagacccgggaggaggccgcggcgatctcggaccgcatc
gacgaggtgcagaccgcctcggccgacacggccgacgacgtcgacgcgatggagtcgcag
gtgtccgagagcgtcggcgccgtcgagtccacgctccgggagttcgaggaggtcgtcgag
gacgtgaccgtcgtcgacgagacggtccaggagatcagcgaggcgaccgacgaccaggcc
cggacgacgcaggaggtcgtcgacatggtcgaggacgtcgcgtcggtgagcggccagacc
gcgaccgaggccgagaccgtcgccgcggcggcggaggagcagaccgcgagcgtctcggag
gtgaccgacagggcacacgcgctctccgatcggtccgacgagctgctcgcgcggctcgac
cggttcgaggtgccggccgagcgcgctacgggggcgtcgagttcgaccggagcgggcgcg
cagtcggagtccggatcgggcgcacagacgcggccgactccgaccgacgactga
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