Halorubrum sp. CBA1229: Hrr1229_013930
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Entry
Hrr1229_013930 CDS
T06658
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
halq
Halorubrum sp. CBA1229
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halq03016
]
Hrr1229_013930 (truA)
Enzymes [BR:
halq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Hrr1229_013930 (truA)
Transfer RNA biogenesis [BR:
halq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hrr1229_013930 (truA)
Prokaryotic type
Hrr1229_013930 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QKY17927
LinkDB
All DBs
Position
complement(2760289..2761242)
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AA seq
317 aa
AA seq
DB search
MTATRAFRVAYDGREFAGFQRQPHATTIEGTLLRALANHGILDRGDGPTHATPPGYAAAG
RTDAGVSAVAQTVSFEAPEWLTPRAFNGHLPGSVRVWAAADVRDGFHATHDADRRTYRYH
LYAPEAGAPSADPAHAVDDVRVRDALDRLSGRHDFHNLTSDDAGTVRDLTATATRDDDLL
VLEVAADGFPRALVRRLVAAVRAVGRGQTDLSRIDRLLDSDPVPGEIGVGPAPPEPLVLW
DVAYEGVSFDVDREAAESARVAFGERYRTARDVAAATGAIRDRVATGYRREPGERGDGDD
GRPVDDGNDGADGDAAF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgacccgcgcgttccgggtcgcgtacgacggccgcgagttcgccggcttccag
cgccagccccacgcgacgaccatcgaggggaccctgctgcgggcgctcgcgaaccacggg
atcctcgaccgcggcgacgggccgacgcacgcgacgccgcccggctacgcggccgcgggc
cggaccgacgccggggtttcggccgtcgcccagacggtctcgttcgaggcaccggaatgg
ctcacgccgcgggcgttcaacgggcacctccccggctcggtgcgggtctgggcggccgcg
gacgtccgcgacggattccacgcgacccacgacgccgaccggcgaacctacaggtatcac
ctctatgcgccggaggcgggagccccctcggcggacccggcccacgccgtggacgacgtg
cgcgtccgcgacgccctcgatcggctctcggggcgccacgacttccacaacctgacgagc
gacgacgcgggaaccgttcgggacctgaccgcgaccgcgacccgggacgacgacctgctc
gtgctcgaggtcgccgccgacggcttcccgcgcgcgctcgtccgtcgcctcgtcgccgcg
gtccgggcagtcggccgcggacagactgatttgtcgcgaatcgaccgcctgctcgactcg
gatccggtgccgggcgagatcggcgtcgggcccgcgccgcccgagccgctggtgctgtgg
gacgtcgcgtacgagggagtctcgttcgatgtcgatcgggaggccgccgagagcgcccgc
gtcgccttcggagagcggtatcggaccgcccgcgacgtcgccgccgcgacgggagcgatc
cgcgatcgggtcgcgaccggctatcggagagagcccggcgagcggggcgacggcgatgac
gggaggcccgtcgacgacggcaacgatggtgccgacggcgacgccgctttttaa
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