Halorubrum sp. CBA1229: Hrr1229_014205
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Entry
Hrr1229_014205 CDS
T06658
Name
(GenBank) mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
halq
Halorubrum sp. CBA1229
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
halq02000
]
Hrr1229_014205
Transporters [BR:
halq02000
]
Other transporters
Pores ion channels [TC:
1
]
Hrr1229_014205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
QKY17973
LinkDB
All DBs
Position
complement(2814953..2815909)
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AA seq
318 aa
AA seq
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MKRPIALGAVALGVVAAVLGTVVGTTGVLDGWPDLIGYSATLVVGRALLVFAVGALLYGS
YRLAVGVLMRSANKRRAYNTRNLLRLVFGFVGTVATLAVLTENWLGLLFSLGVIGFAVTF
ALQQPLLSLIAWVYITVKQPYGVGDRVRIDDAKGDVIGVDFLVTTLWEINGELVTTNQPS
GRVVTVPNSVVLSSNVVNFGGGGSPYVWNEIGIQVAYETDLDFAREVMAEEASDLLGDEM
AAGIAAYREALAETPVELEVHDRPTVNVTQGESWVELRVRYLTHPRQGQRVKNRLYERIL
ERFNDAPDRVAFPVSRSR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgcccaatcgcgctcggcgccgtcgcgctcggcgtcgtcgccgccgtcctcggg
acggtggtggggaccaccggcgtcctcgacgggtggcccgacctgatcggctactccgcg
acgctcgtcgtcggccgggcgctgctcgttttcgcggtgggggcgcttttgtacgggtcg
taccgcctcgcagtcggggtgttgatgcgatcggcgaacaagcggcgcgcgtacaacacg
cgcaacctcctccggctcgtcttcggcttcgtggggacggtcgcgacgctcgcggtgttg
accgagaactggctcggactcctgttctcgctcggggtcatcggcttcgcggtcacgttc
gcgctccagcagccgctcctctcgctcatcgcgtgggtgtacatcacggtgaaacagccg
tacggcgtcggcgaccgcgtccggatcgacgacgcgaagggggacgtgatcggggtcgac
ttcctcgtgacgacgctgtgggagatcaacggtgagctcgtcacgacgaaccagccctcc
gggcgggtggtgacggtgcccaacagcgtggtgctctcctcgaacgtcgtcaacttcggc
gggggcggctccccctacgtgtggaacgagatcgggattcaggtcgcctacgagaccgac
cttgacttcgcgcgagaggtgatggccgaggaggcgagcgacctgctcggcgacgagatg
gccgccggcatcgcggcgtaccgagaggcgctcgccgagacgccggtggagctggaggtg
cacgaccgcccgacggtgaacgtgacgcagggcgagtcgtgggtggagctccgcgtgcgc
tacctcacccacccgcgtcagggacagcgcgtgaaaaaccggctgtacgagcggatcctc
gagcggttcaacgacgcgcccgaccgcgtggcgttcccggtgagtcggagccggtag
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