Halorubrum sp. CBA1229: Hrr1229_015330
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Entry
Hrr1229_015330 CDS
T06658
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
halq
Halorubrum sp. CBA1229
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halq03000
]
Hrr1229_015330
Transcription factors [BR:
halq03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hrr1229_015330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
HTH_10
Phage_integrase
GAF_2
HTH_20
HTH_23
Sigma70_r4_2
Sigma70_r4
Peptidase_C36
Motif
Other DBs
NCBI-ProteinID:
QKY18456
UniProt:
A0A7D4Y4C4
LinkDB
All DBs
Position
complement(3046838..3048616)
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AA seq
592 aa
AA seq
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MVDGLDADAYDALVTAAETYRAAVVVRLAGEVGLRTGEITRVAPRHLSDPGVADVSLLAV
PADDAGARSETDEGSPGGGDAAEPIDRETVVPSSLAAELRRYAESEGLGEAEPFVDVSPR
RVQMIVSETAERAAARTDGAVPADLTPRDLRDAFARRLLVDRGVDPHAVREAGGWETLGT
LDRYLGPLDGRAVAEAYAAAGSDGAAGGTDADAGARRSTALGGFEALADGDGRESPLATV
PARLVESDRWAEAWVVRGSADGGRTEVAGAAGVDREVLVDRGVTREGPWLDAVETGDPVL
TDGDPSADGRPGIAVPASYRDVTHGALCVVAGDGGPVSETEQRELVALGRCLGWAVTAGR
WRDLLHSDAVTEVEFHTADEGAFLARASAALDCRVDLDSTVGVTDDASRLYLSVAGAMPQ
GVADVVDGTGGVSDLRVIETREDGCSASVRVEGGSAVRTLTEHGATVRDATAEDGRVRVV
ADLPKGADVRPVADGLRAAFEDARLASKESVPRSSRSESSFREGVAERFTDRQWAALSAA
YHGGYFDWPRGSTAEEVADAMGVSSPTFHNHLRKAQRALLDGLFDEEHRERR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgggctcgacgccgacgcgtacgacgcgctcgtgaccgccgcggagacgtac
cgcgccgcggtcgtggtccgcctcgccggcgaggtcggcctccggaccggcgagatcacc
cgcgtcgcgccccgacacctcagtgatccgggcgtcgcggacgtctccctcctcgccgtt
ccggccgacgacgcgggagcgcgctccgagaccgatgaggggtcgccgggcggcggcgac
gccgcggaaccgatcgaccgcgagaccgtcgtcccgtcctcgctggcggccgagctccgg
cggtacgccgagagcgaggggctcggcgaggcggagccgttcgtcgacgtctcgccccgc
cgcgtccagatgatcgtgagcgagaccgccgagcgggcggcggcgcggaccgacggcgcg
gtgccggccgacctcacgccgcgcgacctccgagacgccttcgcgcggcgcctcctcgtc
gaccgcggcgtcgacccccacgccgtgcgcgaggccggcggctgggagacgctcgggacg
ctcgacaggtacctcggccccctcgacgggcgggcggtcgccgaggcgtacgcggccgcc
gggagcgacggggcggccgggggcaccgatgccgacgccggcgcgcggcggtcgacagcg
ctcggcgggttcgaggccctcgccgacggcgacggccgagagtcgccgctcgcgacggtc
ccggcgcggctggtcgagtccgaccggtgggccgaggcgtgggtggtccgcggatcggcc
gacggcggccggactgaggtggcgggcgcggccggcgtcgaccgggaggtcctcgtcgac
cgcggcgtcacgcgcgagggcccgtggctcgacgcggtcgagaccggcgacccggtccta
acggacggcgacccctccgcggacggccggcccgggatcgccgtccccgcgagctaccgg
gacgtgacgcacggcgcgctctgcgtcgtcgccggggacggggggccggtctccgagacc
gagcagcgggagctggtcgcgctcgggcgctgtctcggctgggcggtgacggccggccgg
tggcgggacctcctccactccgacgcggtcaccgaggtggagttccacaccgccgacgag
ggggcgttcctcgcccgcgcgagcgccgccctcgactgtcgggtcgacctcgactccacc
gtcggcgtcaccgacgacgcctcgcggctgtacctctccgtcgcgggggcgatgccgcag
ggcgtcgccgacgtcgtcgacgggacggggggcgtctcggacctccgtgtgatcgagacg
cgagaggacggctgctcggcctcggtgcgcgtcgagggcggctcggccgtccggacgctc
acggaacacggcgcgacggtccgcgacgcgaccgcggaggacggccgcgtgcgggtcgtc
gccgacctccccaagggagccgacgtcaggccggtggccgacgggctccgcgcggcgttc
gaggacgcccgcctcgcgagcaaggagtccgtcccccggtcgtcgcgctctgagtcctcg
ttccgcgagggggtcgccgagcggttcaccgaccgacagtgggccgcgctgtccgccgcg
taccacggcggctacttcgactggccccgcgggagcaccgccgaggaggtcgccgacgcg
atgggcgtctcctcgccgacgttccataaccacctccggaaggcccagcgcgcgctcctc
gacggactcttcgatgaggagcaccgggagcgtcggtga
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