Halorubrum sp. CBA1229: Hrr1229_017080
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Entry
Hrr1229_017080 CDS
T06658
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
halq
Halorubrum sp. CBA1229
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
halq03009
]
Hrr1229_017080
Ribosome biogenesis [BR:
halq03009
]
Prokaryotic type
ribosomal protein modification factors
Hrr1229_017080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
QKY18624
LinkDB
All DBs
Position
pCBA1229:176423..177505
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AA seq
360 aa
AA seq
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MEPQAMITAIGEAIERYCLSMTNLSDFEFGAYSEFSEIAVPPAAFNMFSESQLSQRGLSE
RILNEGKYHWTATREITSGDRRLVPGQLIYLPFNHNTVFRSPISTGAATGTGYLGACYRA
ICEIIERECLMITYLNKLSVPHIDKSTIPDEAKTYHNILKSRGRTVYLLNISLDQPVPTC
LAIAVDSESRPALSLGLGCDWNMGDAVRDALREALQISDWEVEDLNKPPSPSDIDSVEER
ARFWAPDERISDIRFWLTPTDEIAVEDCREATDKNPLETILRYLNKRDYECYIADVTTSD
VAQYGFKTVKAIIPEMHPMHLREKFRYLGGNRLYELPVEIGLSNIKNTEDELNQVPQPFL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggagccccaggcaatgattactgcgattggagaagcaatcgaacgctactgcctgtca
atgactaatttatctgactttgagtttggtgcgtattccgagttttcagagattgcagtc
ccaccggccgcattcaatatgttttctgaatcacaattatctcagcgagggttgtcggaa
cgtatactgaatgaagggaagtaccactggactgcaaccagagaaataacttctggcgac
cggagactagtgcccggccagcttatttatcttccattcaatcataatacagtatttcgc
tctccgatctcaacgggtgccgctactggaacaggatatctaggtgcatgttatcgcgca
atttgtgagattatagaaagagaatgcctaatgataacctatttgaataaactttcggtt
ccccatatagacaaatctactattcctgatgaggctaagacatatcataatatattgaaa
tctcgtggaagaacagtatatttgctcaatatctctttagaccaaccagttccaacctgc
ttggcaatagcagttgatagtgaaagtaggccagctctcagtctgggattgggatgtgat
tggaacatgggagatgccgttagagatgcgcttcgtgaagctctccaaatcagtgattgg
gaggtcgaagatctgaataaaccgccatccccctctgacatcgactcagttgaggaacgt
gctcggttttgggcacctgatgagagaatctcagatattcggttttggttgacgcccacc
gatgagatcgctgtcgaagattgtcgtgaagcaacggacaaaaacccgttagagacgata
ctcagatatctcaataagcgtgattatgagtgttatatcgcagatgtaacgacctcagat
gtagcacagtatgggtttaagactgtgaaggcaattattccagaaatgcatccaatgcat
ttgcgagaaaaatttcgatatcttggtgggaatagactttatgaacttccggtcgagatc
ggtctatcgaatataaaaaatacagaagacgaactcaatcaagttccacagccattccta
tga
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