Halorubrum sp. CBA1229: Hrr1229_017680
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Entry
Hrr1229_017680 CDS
T06658
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element transposase accessory protein TnpB
KO
K07496
putative transposase
Organism
halq
Halorubrum sp. CBA1229
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Hrr1229_017680 (tnpB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
C1_2
Pyruv_OxRed_insertion
Zn_Ribbon_TF
DUF4298
Motif
Other DBs
NCBI-ProteinID:
QKY18810
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Position
pCBA1229:296373..297647
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AA seq
424 aa
AA seq
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MSRTIRTFEATITNQQQVRDDLDQLGWAASKLWNVGRYYAQEQWDETGEIPDDGELKAEL
KRHERYTDLHSQSSQRVLEELAEAFNGWFGKRRNGDDRARPPGYRKNGDSHPRSTVSFKA
AGFKHDAQFTRVRLSKGLNLKEHRSDFILCEYQTRPDVDLTEWDIQQVRAIYKRDEWRLQ
FVCRTTIDPDPPGDEVAGVDLGMCNFAAVSFGGESMLYPGGALKEDEYYFTKKKAKCDDS
SSRVATRLDRTRRGRRTHFLHALSKAIVEECVERDVGTLVVGDLGGIREDDENGESRNWG
DHGNLDLHGWAFDRFTALLDYKAEAEGIDVELVSERDTSKSCSACGHTDDNQRVERGLYV
CEACDTVANADVNGAENIRQKVLPSLATDGGDRDNGWLAQPAVHLFDRSEGRFAPREQVV
NREP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaaccatccgaaccttcgaggctactatcacgaatcagcaacaggttcgtgac
gaccttgaccaactcggatgggccgcctcaaaactctggaacgtcggtcgctactacgca
caagaacagtgggacgaaacgggcgagatccccgatgacggggaactcaaagccgaactc
aaacgccatgaacgctacacggacttacattctcagtccagtcagcgcgttctcgaagaa
ctcgctgaagcgttcaacggctggttcggcaagcgtcggaacggcgacgaccgtgccaga
ccgcccggctaccgcaagaacggagactcccacccacgttcaaccgtgtcgttcaaagcg
gctggcttcaagcacgacgcacagttcacccgtgtccgcctctcgaaaggcctcaacctc
aaagaacaccgttcagacttcatcctgtgtgagtaccagactcgcccggatgttgacctg
accgagtgggacattcagcaggttcgcgcgatctacaagcgcgacgagtggcgactacaa
ttcgtctgtcgcaccactatcgacccggacccaccgggcgacgaagtggccggtgttgac
ctcgggatgtgcaacttcgccgccgtctcgttcggcggtgaatcgatgttgtatcccggt
ggcgcactcaaagaggacgaatactacttcacgaaaaagaaggctaagtgcgacgattcc
tcgtctcgtgtggccacccgtcttgaccggacgcggaggggtcgtcggacacacttcttg
cacgcactctcgaaagcgattgtcgaggagtgcgtcgaacgagatgtcgggactcttgtc
gttggcgacctcggcgggatccgagaggacgacgagaacggcgagtctcggaattggggc
gaccacggcaatcttgacttgcacgggtgggcgttcgaccgcttcacggcgctacttgac
tacaaggcggaagccgaaggcatcgacgtggagttggtgtcggaacgcgatacgtcgaag
tcgtgttcagcatgtggtcacacggatgacaatcagcgtgtggaacgtgggttgtacgtc
tgtgaggcgtgcgatacggttgcgaacgcggacgtgaacggtgcggagaacattcgacaa
aaggtactcccgagtctcgccacggatggcggcgatagggataacggctggttggcacag
ccagcggttcacctgttcgaccgcagcgagggccgtttcgccccacgagaacaggtcgtg
aaccgcgaaccataa
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