Halarchaeum sp. CBA1220: EFA46_002535
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Entry
EFA46_002535 CDS
T06674
Name
(GenBank) transcriptional regulator
KO
K07728
putative transcriptional regulator
Organism
halr
Halarchaeum sp. CBA1220
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halr03000
]
EFA46_002535
Transcription factors [BR:
halr03000
]
Prokaryotic type
Helix-turn-helix
Other families
EFA46_002535
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_19
HTH_3
HTH_31
HTH_11
HTH_23
HTH_25
HTH_19
HTH_28
HTH_8
Sigma70_r4
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QLC33129
LinkDB
All DBs
Position
470302..471270
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AA seq
322 aa
AA seq
DB search
MSRSALIENVTAMLADAGFTVSDRCVIRPKSFDVAARRGEDLLFLKVLGNVDAFDAPTGA
EMRRLGHYLHGTPIVVGLRTRDQELEPGVVYFRHGVPVISPDTAMDLFVEGVPPLVYAAP
GGLYVNIDGDVLSDEREQRGWSLGRLATELGVSRRTVSKYEDGMNASIDVAVKLEDVFGD
ALTSPVDVLDGADEVRDADPTPDDPEADPEDEPIVAVLTRAGFDVHPTVRAPFKAVGEDT
ERPSGLLTGHSTLTDAAVKRARIMASVGRVTRTRAVYFVDEAKQESIGGTAIIERSELER
IDDPAEFRDLLQERGDDAETEA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggtcggcactcatcgagaacgtcaccgcgatgctagcggacgcggggttcacg
gtgagcgaccgctgcgtcatccggccgaagagcttcgacgtcgccgctcggcgcggtgag
gacctcctcttcctgaaggtcctcgggaacgtcgacgccttcgacgccccgacgggcgcc
gagatgcgacgcctcggtcactacctccacggcacgcccatcgtcgtggggttgcgcacg
cgcgaccaggaactcgaacccggcgtcgtctacttccgccacggcgtccccgtcatcagc
cccgacaccgcgatggacctcttcgtcgagggcgtccccccgctcgtctacgccgccccc
ggcggcctctacgtcaacatcgacggcgacgtcctctcggacgaacgcgaacagcgcggc
tggagcctcggtcgcctcgccaccgaactcggcgtctcccgacgcaccgtctcgaagtac
gaggacggcatgaacgccagcatcgacgtcgccgtcaagctcgaggacgtcttcggcgac
gccctcaccagccccgtcgacgtcctcgacggcgcggacgaggtccgcgacgccgacccc
accccggacgaccccgaggccgacccggaggacgaacccatcgtcgccgtcctcacgcgc
gccggcttcgacgtccacccgaccgtccgcgcgccgttcaaggccgtcggtgaggacacc
gagcgcccctcggggctcctcaccggccactcgacgctcaccgacgccgccgtcaagcgc
gcgcgcatcatggcgagcgtcgggcgcgtcacccgcacgcgggcggtctacttcgtcgac
gaggccaaacaggagtccatcggcggcaccgccatcatcgagcgctcggagctcgaacgc
atcgacgaccccgccgagttccgcgacctcctccaggagcgcggcgacgacgccgagacg
gaagcgtaa
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