Halarchaeum sp. CBA1220: EFA46_002545
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Entry
EFA46_002545 CDS
T06674
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EFA46_002545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halr03019
]
EFA46_002545
03012 Translation factors [BR:
halr03012
]
EFA46_002545
Messenger RNA biogenesis [BR:
halr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
EFA46_002545
Translation factors [BR:
halr03012
]
Eukaryotic type
Release factors
EFA46_002545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
ZnF_RZ-type
RbpA
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QLC33131
UniProt:
A0A7D5IXX6
LinkDB
All DBs
Position
471988..473244
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AA seq
418 aa
AA seq
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MSEQQGEEASEDRRKYEFRKVIEQLQDYSGSGTQLVTIYVPEDKQVSDVVAHVTQEHSEA
SNIKSKQTRTAVQDALTSIKDRLRYYDTFPPENGMVLFSGSIDVGGGQSDMVTEVLESPP
EPIQSFRYHCDSAFLTEPLENMFADKGLYGLVVLDRREANVGWLKGKRVEPVKSASSLVP
GKQRKGGQSAQRFARLRLEAIDNFYQEVAGMANDLFVDRRHELDGILVGGPSPTKDEFLD
GDYLHHELQDKVLGKFDVSYTDESGLYDLVDAGSAALAEAALMEDKNAMESFFKELHNGD
LATYGFEATRRNLVMGSVETLLLSEDLRQDVVTYECPNGHEERELIDRRTDEVPAHECEE
CGETVEEGEREDAIDHLMNIADQRGTETTFISTDFEKGEQLLNAFGGIGGLLRYSTGV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcagcagggcgaagaggcgtccgaggaccgccggaagtacgagttccggaag
gtcatcgagcagctccaggactactccgggagcgggacgcaactcgtcaccatctacgtc
cccgaggacaagcaggtctcggacgtggtcgcacacgtcacccaggagcactcggaggcg
tcgaacatcaagtcgaagcagacccgaacggcggtccaggacgcgctgacctcgatcaag
gaccgcctgcgctactacgacacgttcccgccggagaacgggatggtgctcttctcgggc
tccatcgacgtcggcggcgggcagtcggacatggtgaccgaagtgctggagtccccgccc
gagcccatccagtccttccgctatcactgcgacagcgcgttcctcacggagcccctcgag
aacatgttcgcggacaagggcctctacgggctcgtcgtcctcgaccgccgcgaggcgaac
gtcgggtggctgaagggcaagcgcgtcgagcccgtgaagtccgcgtcgtcgctcgtgccg
ggcaagcagcgcaaaggtggccagtccgcccagcgtttcgcgcgcctgcgcctcgaggcc
atcgacaacttctaccaggaggtcgcgggaatggcgaacgacctcttcgtcgaccgacgc
cacgagctcgacggcatcctcgtgggcggcccctcaccgacgaaggacgagttcctcgac
ggcgactacctccaccacgagctccaggacaaggtcctcgggaagttcgacgtctcctac
acggacgagtccggcctctacgacctcgtcgacgcgggctcggccgcgctcgcggaggcg
gcgctcatggaggacaagaacgcgatggagtcgttcttcaaggagctccacaacggcgac
ctcgccacgtacggcttcgaggcgacgcgtcgcaacctcgtgatgggctccgtcgagacg
ctcctcctcagcgaggacctccgacaggacgtcgtcacctacgagtgcccgaacggccac
gaggagcgcgagctcatcgaccgccggacggacgaggtccccgcccacgagtgcgaggag
tgcggggagacggtcgaggagggcgagcgcgaggacgccatcgaccacctcatgaacatc
gccgaccagcgcgggacggagacgacgttcatcagcacggacttcgagaagggcgaacag
ctcctgaacgcgttcggcggaatcggcggcctgcttcgctactccacgggcgtctga
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