Halarchaeum sp. CBA1220: EFA46_003595
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Entry
EFA46_003595 CDS
T06674
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EFA46_003595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halr03400
]
EFA46_003595
DNA repair and recombination proteins [BR:
halr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EFA46_003595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
HHH
RecR_HhH
IMS_HHH
DUF6432
Motif
Other DBs
NCBI-ProteinID:
QLC33328
UniProt:
A0A7D5IFW3
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Position
658455..660428
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AA seq
657 aa
AA seq
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MELEEVPGVGAKTAERLRELDDPMAAVEREDVAAVASASGVSAGRAAHIVRGAIRARHDD
PGGFLATDRAREVYDAVLALLQERAVTTYGEHRLATIYPSAVDSRIEEVRAFAERARERD
PDPAVLDALADVAPVERPADVTVRDRCLATTDAETYSEASEAFPELSVEIVEDAHGLADL
ARGYASVVALDEAFAGVTIDGDVTVDPNALSHPEEYVPERTLAFFATNRASLRAAIRVHR
RAGLEAAVDLDELEAGLAELDADGGVAGDEELERLQIAVDDLDAAVSTAESMANDRLREE
IEERDVTIEGADLLSLVERGAGVDSLLSRELADEYAEAVRAAREHVADALALREDEASLA
DQVFGDEPTYPVERREEAVSRLREELVAERDRRAAKRKREVAARLANLRAGAADLVRDAL
ELDVELAVSRFCADFDCTPAERAGTGFDIEGGRSPLLDVPFADVEPVDYGVSGVALLSGV
NSGGKTSTLDLVAVVVVLAHMGLPVPAESARVPAVEELHYYAKSQGTLDAGAFESTLRDF
AALTRGADAKCVLVDELESITEPGASAKIIAGILEELHDAGATGVFVSHLAGEIRDTAAY
DVDVDGIRAVGLEDGELVVERSPEKGLLARSTPELIVEKLAEEGADRAFYEGLLEKF
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggaactggaggaggtcccgggcgtcggcgcgaagacggccgagcgactgcgcgaactc
gacgacccgatggctgccgtagagcgcgaggacgtcgccgccgtcgcgtccgcgtccggc
gtttcggcgggccgcgccgcgcatatcgttcggggcgcgatccgcgcgcgacacgacgac
cccggcggcttcctcgccaccgaccgcgcccgcgaggtgtacgacgcggtcctcgcgttg
ctacaggagcgcgcggtgacgacgtacggcgagcaccgcctcgcgacgatctacccctcg
gcggtcgactcgcgcatcgaggaagtgcgggcgttcgccgagcgggcacgcgagcgcgac
cccgaccccgccgtgctcgacgcgctcgcggacgtcgcgccggtcgagcgcccggcggac
gtcaccgtcagggaccgctgtctcgcgacgacggacgccgagacgtacagcgaggcgagc
gaggcgttccccgagctctccgtcgaaatcgtcgaggacgcacacggcctcgcggacctc
gcgcgcggctacgcgtcggtcgtcgcgctcgacgaggcgttcgcgggcgtcaccatcgac
ggcgacgtcaccgtcgacccgaacgcgctctcccaccccgaggagtacgtcccggagcgc
acgctcgcgttcttcgcgacgaaccgcgcgtcgctccgggcggcgattcgggtgcaccgc
cgcgccggcctcgaggccgccgtcgacctcgacgagctcgaagcgggcctcgcggagctc
gacgccgacgggggtgtcgcgggcgacgaggagctcgagcgcttacagatagccgtcgac
gacctcgacgccgccgtctcgacggccgagtcgatggcaaacgaccgcctcagggaggag
atcgaggagcgcgacgtcaccatcgagggcgcggacctactctcgctcgtcgagcgcggc
gcgggcgtcgactccctgctctcgcgcgagctcgcggacgagtacgccgaggcggtgcgc
gcggcccgggagcacgtcgcggacgccctcgcgctccgcgaggacgaggcgagcctcgcc
gaccaggtcttcggcgacgagcccacgtatccggtggagcgccgcgaggaggcagtgtcg
cgtctgcgcgaggagctcgtcgccgagcgcgaccgccgggcggcgaagcgcaagcgcgag
gtggcggcgcgcctcgcgaacctccgtgcgggcgccgccgacctcgtccgggacgccctc
gagctcgacgtcgagctcgccgtcagtcgcttctgcgcggacttcgactgcacgcccgcc
gagcgcgccggaaccggcttcgacatcgagggcgggcgctcgccgctcctcgacgtgccg
ttcgcggacgtcgagcccgtcgactacggcgtgagcggcgtcgcgctcctctccggcgtg
aactccggagggaagacgagcacgctcgacctcgtggcggtggtggtggtgctcgcgcac
atgggcctcccggtgcccgccgagtcggcgcgcgtcccggcggtcgaggagctccactac
tacgcgaagagccaggggacgctggacgcgggcgccttcgagtccacgctccgcgacttc
gcggcgctcacgcggggcgcggacgcgaagtgcgtgctcgtcgacgagctcgagtccatc
accgagcccggggcgtccgcgaagataatcgcgggcatcctcgaggagctccacgacgcg
ggcgcgaccggcgtcttcgtctcccacctcgccggcgagatacgcgacaccgccgcctac
gacgtggacgtggacggcattcgcgcggtcggcctcgaggacggcgagctggtggtcgag
cgctccccggagaaggggttgctcgcgcgctcaacgcccgagctcatcgtggagaaactc
gccgaggagggcgctgaccgggcgttctacgaggggctgctggagaagttctga
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