Halarchaeum sp. CBA1220: EFA46_003785
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Entry
EFA46_003785 CDS
T06674
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
halr
Halarchaeum sp. CBA1220
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halr03016
]
EFA46_003785 (thpR)
Enzymes [BR:
halr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EFA46_003785 (thpR)
Transfer RNA biogenesis [BR:
halr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EFA46_003785 (thpR)
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
QLC33361
UniProt:
A0A7D5E562
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All DBs
Position
692871..693428
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AA seq
185 aa
AA seq
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MRLFVSVDLPESLVEPVRTLQSAFADADGLDLVDPANAHVTLAFLGDIDDGEYEDAVAAL
ERGVEEADVAPFEASFEGLGVFPSMEYISVVWLGVEAGADRLTALHDALEREYAALGVEA
DDHEFTPHVTLGRLRHAGGKERVREVVREHAADVGRMRVEEVRLAESTLTHDGPEYETRE
RVPLR
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgttcgtcagcgtcgacctccccgagtcgctcgtcgaaccggtacggaccctc
cagtcggcgttcgcggacgcggacggcctcgacctcgtcgaccccgcgaacgcgcacgtc
acgctcgcgttcctcggcgatatcgacgacggcgagtacgaggacgcagtcgccgcgctc
gaacgcggcgtcgaggaagcggacgtcgcgccgttcgaggcctccttcgaggggctcggc
gtcttcccgagcatggagtacatctcggtcgtgtggctcggcgtcgaagcgggcgccgac
cgcctcacggcgctccacgacgcgctcgaacgcgagtacgccgcgctcggcgtcgaggcc
gacgaccacgagttcacgccccacgtcacgctcgggcggctgagacacgccggcgggaaa
gagcgcgtccgagaggtcgttcgggagcacgcggccgacgtcggacggatgcgcgtcgag
gaagtgcgcctggcggagagcacgctcacccacgacggccccgagtacgagacgcgcgaa
cgcgtcccgctccgctga
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