Halarchaeum sp. CBA1220: EFA46_004835
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Entry
EFA46_004835 CDS
T06674
Name
(GenBank) single-stranded DNA-binding protein
KO
K03265
peptide chain release factor subunit 1
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EFA46_004835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halr03019
]
EFA46_004835
03012 Translation factors [BR:
halr03012
]
EFA46_004835
Messenger RNA biogenesis [BR:
halr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
EFA46_004835
Translation factors [BR:
halr03012
]
Eukaryotic type
Release factors
EFA46_004835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-ProteinID:
QLC33553
LinkDB
All DBs
Position
complement(892246..893301)
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AA seq
351 aa
AA seq
DB search
MQTSLSRAERIEAVEEASADGDRLVSVAVAHDASLGPTLERVEEAHAKAEYLDGRASGPL
KRALERVVRELHRVEETPEDGLVVYAGVVGGSLETYVFTDPPGRVAEGVFEHGNAFVTAP
LERGAASRRTVGLVVVERGGAAVGRLDGDGVETLETFESAVPGKTRAGGQSADRFRRRRE
ERKREFFASVGEAAGREFDDPDALALGGTHVTVEAFRDGDYLPAELAARVAGTYAVEYAG
ERGLERLAAAANGDVGETHERAQRALSEFFSRLPDGDVTYGEERVGEALDYGAVDRLLVA
ADVDAATRELYAERADEEGGDVVVVPERVEGGARFARAFDGVGALLRFPVE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgtcgctgtcgcgcgcggagcgcatcgaggccgtcgaggaggcgtcggcggac
ggcgaccggctcgtgtcggtggcggtggcccacgacgcgtcgctcgggccgacgctcgag
cgcgtcgaggaggcgcacgcgaaggcggagtacctcgacgggcgggcgagcgggccgctg
aagcgggcgctggagcgcgtcgtgcgcgaactgcatcgcgtcgaggaaacgcccgaggac
ggcctcgtcgtctacgcgggcgtcgtgggcgggagtctcgagacgtacgtcttcacggac
ccgcccggccgggtcgccgagggcgtcttcgagcacgggaacgcgttcgtgacggcgccg
ctggagcgcggcgcggcgtcgcgtcgaacggtcggcctcgtcgtcgtggagcgcggtggc
gcggcggtcggccgactcgacggcgacggcgtcgagacgctggagacgttcgagagcgcg
gtgccggggaagacgcgcgctggcgggcagtcggcggaccggttccgccgccgtcgcgag
gagcgaaagcgcgagttcttcgcgtcggtgggcgaggcggcggggcgggagttcgacgat
cccgacgccctcgccctcggggggacgcacgtcaccgtcgaggcgttccgcgacggcgac
tacctccccgccgagttggcggcgcgcgtggcgggcacgtacgccgtcgagtacgcgggc
gagcgcggcctcgaacggctcgcggcggcggcgaacggggacgtgggggagacgcacgag
cgcgcacagcgggcgctctcggagttcttctcgcgactgccggacggcgacgtgacgtac
ggcgaggagcgcgtcggggaggctctcgactacggcgcggtcgaccgactcctcgtcgcg
gcggacgtggacgcggcgacgcgcgagctctacgcggagcgggctgacgaggagggcggg
gacgtggtggtcgtccccgagcgcgtggagggcggggcgcgcttcgcgcgggcgttcgac
ggcgtcggcgcgctcctccggttccccgtcgagtga
DBGET
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