Halarchaeum sp. CBA1220: EFA46_004995
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Entry
EFA46_004995 CDS
T06674
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EFA46_004995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halr03021
]
EFA46_004995
Enzymes [BR:
halr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EFA46_004995
Transcription machinery [BR:
halr03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
EFA46_004995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HTH_3
HTH_24
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QLC33582
UniProt:
A0A7D5HVL1
LinkDB
All DBs
Position
925480..928416
Genome browser
AA seq
978 aa
AA seq
DB search
MSTGQSPKEIGEISFGLMDPEEYREMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGL
ECKTCGNRSGSCNGHFGHIELAAPVIHVGFAKLIRRLLRGTCRSCSRLLLTEDEKEEYLG
NLERTRGLRQDVSDVTKSAIREARKKNNCPYCGESQYDVKHEKPTTYYEVQQVLASDYSE
RIASAMQPDPDEDDAGISPQALAEETDIDISRINEILSGEFRPREESRKAIEKAIGADLT
MEDMNKLMPSDIRDWFEDIPGEDLEVLGVDSERSRPEWMILTVLPVPPVTARPSITLDNG
QRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPAR
HRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPERVAREMT
QTMVVNEQNMERAKQYVRNGPEGHPGANYVKRPDGRRVRVTEKVCEELAERIETGWEVQR
HLIDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNMHALQN
EEARAEARVLMRVQEQILSPRFGENIIGAIQDHISGMYLLTHDNPSFNETQALDLLRQTR
IDELPPADGTDADGNEYWTGYTLFSELLPDDLNLEFKSSAGEDVVIEDGQLVQGTIDEDG
VGEFGSDIVDTIMKVYGATRARIFINEVAALAMRAIMHFGFSIGIDDESISAEAQERIDD
AIDNAYERVEELIDSYEAGDLESLPGRTVDETLEMKIMQTLGKARDSAGDIAGDHFDDTN
PAVVMAESGARGSMLNLTQMAGCVGQQAVRGERINRGYEDRTLSHYAPNDLSAEAHGFVE
SSYTSGLDPKEFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGTVRDTSD
TIVQFEFGEDGTSPVRVSSGEDADIDVDSIADRVLESEFESEAELEEFIGEREPPTNLSE
HGESWTMEGETWSAEGDD
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaggccagtcacccaaggagatcggggagatcagcttcgggctgatggacccg
gaggagtaccgcgagatgagcgcgacgaaggtcatcaccgccgacacgtacgacgacgac
ggcttccccatcgacatggggctgatggacccgcgtctcggcgtcatcgaccccggcctc
gagtgcaagacctgcgggaaccgctctggttcctgtaacggccacttcggccacatcgag
ctcgcggcgcccgtcatccacgtcgggttcgcgaagctcatccgccgcctcctgcgcggc
acctgccggagctgcagtcgcctcctcctcaccgaggacgagaaggaggagtacctcggg
aacctcgaacggacgcgcgggctgcgacaggacgtctccgacgtcacgaagtccgcgatc
cgggaggcccgcaagaagaacaactgcccgtactgcggggagtcccagtacgacgtcaag
cacgagaagcccaccacctactacgaggtccagcaggtcctcgccagcgattactccgag
cgcatcgcctccgcgatgcagccggaccccgacgaggacgacgcgggcatcagcccgcag
gcgctcgccgaggagaccgacatcgacatctcgcgcatcaacgagatcctcagcggcgag
ttccgcccgcgcgaggagagccgcaaggccatcgagaaggccatcggcgcggacctcacg
atggaggacatgaacaagctgatgccgagcgacatccgggactggttcgaggacatcccg
ggcgaggacctcgaggtgctcggcgtcgactcggagaggtcgcgtcccgagtggatgatc
ctcaccgtcctcccggtgccgccggtcacggcgcggccgtccatcacgctcgacaacggt
cagcgctccgaggacgacctcacgcacaagctcgtggacatcatccgcatcaaccagcgg
ttcatggagaaccgcgaagcgggtgcgccccagctcatcatcgaggacctctgggaactg
ctccagtaccacgtcacgacgttcatggacaacgagatcagcgggacgccgccggcgcgc
caccgctccgggcgcccgctgaagacgctcagccagcgcctgaagggcaaggagggccgc
ttccgcggctcgctctccgggaagcgcgtgaacttctccgcccggaccgtcatcagcccg
gacccgacactgagtctgaacgaggtcggcgtccccgagcgcgtcgcgcgcgagatgacg
cagacgatggtcgtcaacgagcagaacatggagcgggcgaagcagtacgtccgcaacggc
cccgagggccaccccggtgcgaactacgtgaagcgaccggacggccggcgcgtgcgcgtc
accgagaaggtctgcgaggaactcgccgagcgcatcgagacgggctgggaggtccagcgc
cacctcatcgacggcgacatcgtcatcttcaaccgccagccgtcgctccaccggatgagc
atcatggcccacgaggtggtcgtgatgccgtacaagacgttccggctgaacaccgtcgtc
tgtccgccgtacaacgccgacttcgacggcgacgagatgaacatgcacgccctccagaac
gaggaggcgcgcgcggaagcccgcgtcctcatgcgcgtgcaggagcagatcctcagcccg
cgcttcggtgagaacatcatcggcgcgattcaggaccacatcagcgggatgtacctcctg
acgcacgacaacccgtcgttcaacgagacgcaggcgctcgacctgctgcgtcagacgcgc
atcgacgaactcccgcccgccgacggcacggacgccgacggcaacgagtactggacgggc
tacacgctcttcagcgagctcctccccgacgacctcaacctcgagttcaagtcgagcgcc
ggcgaggacgtcgtcatcgaggacggccagctcgtgcaggggaccatcgacgaggacggc
gtcggcgagttcgggagcgacatcgtcgacaccatcatgaaggtgtacggcgcgacgcgc
gcacgcatcttcatcaacgaggtcgcggcgctcgcgatgcgcgcgatcatgcacttcggg
ttctccatcgggatcgacgacgagtcgatttccgccgaggcccaggaacgcatcgacgac
gccatcgacaacgcctacgagcgcgtcgaggaactcatcgactcctacgaggcgggcgac
ctcgagagcctgcccggtcggacggtcgacgagacgctcgagatgaagatcatgcagacg
ctcgggaaggcccgcgactccgccggcgacatcgcgggcgaccacttcgacgacacgaac
ccggcggtcgtcatggccgagtccggggcgcgtgggtcgatgctgaacctcacgcagatg
gccggctgtgtcggccagcaggcggtgcgcggcgagcgcatcaaccgcggttacgaggac
cgcacgctcagccactacgcgccgaacgacctctccgccgaggcacacggcttcgtcgag
agctcctacacgtccggtctggacccgaaggagttcttcttccacgcgatgggtggccgc
gagggcctcgtcgacacggcagtccggacctccaagtccggctatctccagcgtcgcctc
atcaacgcactctccgagctcgaaacgcagtacgacggcaccgttcgggacacctccgac
acaatcgttcagttcgagttcggtgaggacggcaccagtccggtgcgcgtctcgtccggt
gaggacgccgatatcgacgtcgacagcatcgccgaccgcgtcctcgaatccgagttcgag
agcgaggccgagctcgaggagttcattggcgagcgcgagccgccgaccaacctctccgag
cacggcgagtcgtggacgatggagggcgaaacctggagcgccgagggtgacgactaa
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