Halarchaeum sp. CBA1220: EFA46_005185
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Entry
EFA46_005185 CDS
T06674
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03420
Nucleotide excision repair
halr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EFA46_005185
03430 Mismatch repair
EFA46_005185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halr03400
]
EFA46_005185
Enzymes [BR:
halr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EFA46_005185
DNA repair and recombination proteins [BR:
halr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EFA46_005185
MMR (mismatch excision repair)
Other MMR factors
EFA46_005185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
Herpes_ori_bp
AAA_11
AAA_12
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QLC33619
UniProt:
A0A7D5DZN9
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All DBs
Position
complement(962308..964158)
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AA seq
616 aa
AA seq
DB search
MSESEPQVTRLFGGPGSGKTTALLDRVEEILEDDDVEINDVLVVSYTRAAAAEVRERLAE
RLDVSPRSLRGNVSTMHAKAYELLNLSRGDVVGEDDKEAFCEDYGLPYEDEYASGSRRTA
RSTTLGNKVIATSQWLQRTGRDVSEWYDVPFRWDEEEVRLPPEIDDNAQVGNKYTPTWPS
SDDRYDIPESIRAWRAYKGENDLVGFADMLERVQQRSLVPNVDYLVIDEFQDITSLQYQV
YQEWRPHMEAVLIAGDDDQVVYAWQGADPDLLLDTEVTENVVLPNSYRLPSEVLKVVQQE
VSHITHRQEKDLNPRKEGGTVEAVDSPSMLDLVRNVRRTIETTDETVMILFRARYQLFDF
VDEFITEGIPFKALTDQRLWTDRLQQYVNAVEAIDAGEPVTGVQARRLMDMLQDSAFGTS
ERSDFRDEIDARRAEAGEGEEDADLDTMEFSAEFIRNWVPFVPAPAAAADMLRKVTRYQR
RSIDAYFRGDYQGMDSDRVRVGTIHSAKGREADHVFLGTDLTEKVVEQMAATVDPDDLPE
GVEEFTRQTDPVPILTDNERRVFYVGMSRARERLVLMQNLVTGAPTLPLDVLLYGKPTGE
TLEEALANAAAPISIN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtcggagccacaggtcactcgcctgttcggcggtcccgggagcgggaagacg
acggcgctcctcgaccgcgtcgaggagattctcgaagacgacgacgtcgagatcaacgac
gtgctcgtcgtctcctacacccgagcggcggcggcggaggtgcgcgagcgtctcgccgag
cgcctcgacgtgagcccgcggtcgctgcgcgggaacgtcagcacgatgcacgcgaaagcg
tacgaactcctgaacctctcgcgcggcgacgtcgtcggcgaggacgacaaggaggcgttc
tgcgaggactacggcctcccctacgaggacgagtacgcgtcggggtcgcggcgcaccgcg
cgctcgacgacactcggcaacaaggtcatcgcgaccagccagtggctccagcgaaccggc
cgcgacgtctccgagtggtacgacgtgcccttccgctgggacgaggaggaagtgcgtctc
ccgcccgaaatcgacgacaacgcgcaggtcgggaacaagtacacgccgacgtggccgtcg
agcgacgaccgctacgacatccccgagtccattcgcgcctggcgcgcctacaagggcgag
aacgacctcgtcggcttcgcggacatgctcgagcgcgtccagcagcgctcgctcgtcccg
aacgtcgactacctcgtcatcgacgagttccaggacatcacgagcctccagtatcaggtc
tatcaggagtggcgtccccacatggaggccgtcctcatcgccggcgacgacgaccaggtc
gtctacgcgtggcagggcgcggaccccgacctcctcctcgacacggaggtgacggagaac
gtcgtcctcccgaactcctatcgcctcccctcggaggtcctgaaggtcgtccagcaggag
gtcagccacatcacccaccgccaggagaaggacctgaacccgcgcaaggagggcgggacg
gtcgaggccgtcgactcgccgtcgatgctcgacctcgtgcggaacgttcggcggaccatc
gagaccaccgacgagacggtgatgatcctcttccgcgcgcgctaccagctcttcgacttc
gtcgacgagttcatcaccgagggcatcccgttcaaggcgctcaccgaccagcgcctctgg
acggaccgcctccagcagtacgtcaacgccgtcgaggccatcgacgccggcgagcccgtc
accggcgtgcaggctcgccgcctgatggacatgctgcaggactccgcgttcggcacgagc
gagcggagcgacttccgcgacgagatcgacgcccggcgcgccgaagcgggcgagggcgag
gaggacgccgacctcgacacgatggagttcagcgcggagttcatccgcaactgggtgccc
ttcgtccccgcgcccgccgccgccgccgacatgctccggaaggtcacgcgctaccagcgc
cgctccatcgacgcctacttccgcggcgactaccagggcatggactcggaccgcgttcgc
gtgggcaccatccactccgcgaagggtcgcgaggccgaccacgtcttcctcggcaccgac
ctcacggagaaggtcgtcgagcagatggcggccaccgtcgaccccgacgacctccccgag
ggcgtcgaggagttcacgcgacagaccgaccccgtccccatcctcacggacaacgagcgc
cgcgtcttctacgtcgggatgtcccgcgcgcgagagcgcctcgtcctcatgcagaacctc
gtgacgggcgcgccgacgctcccgctcgacgtcctgctctacggcaagccgaccggcgag
acgctggaggaggcgctggcgaacgccgccgcgcccatctcgatcaactag
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